Non-Coding RNA Search

ramn3506b_c16.y1

Sequence:


               
               GATTAGAACAAATGTGTACTGCAAATTTCTGTGACGCCTGGGAAAAAGGAAATGTGCGTT
ACAGAGCTGGGCAGAGCCACATGTCCTGTGACAAGCCGGCGACTTGAAAAATTTAATTCA
GGAAGAGACGCAAAGAGGCCAAATCGAAAGAGGAACTGGGCCTATCGATGTTCAGAGCAG
GAAAACCGAAGAAGTTACCAACCATCCCCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATTAGAACAAATGTGTACTGCAAATTTCTGTGACGCCTGGGAAAAAGGAAATGTGCGTT
ACAGAGCTGGGCAGAGCCACATGTCCTGTGACAAGCCGGCGACTTGAAAAATTTAATTCA
GGAAGAGACGCAAAGAGGCCAAATCGAAAGAGGAACTGGGCCTATCGATGTTCAGAGCAG
GAAAACCGAAGAAGTTACCAACCATCCCCAA

Aligned organism(s): 13 entry(ies)

More info

Aligned organism(s): 13 entry(ies)

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               13-203, gnl|bosTau2|chr13 (62321755-62321942)
               

               
               13-203, gnl|canFam2|chr24 (42532956-42533517)
               

               
               13-203, gnl|dasNov1|scaffold_16241 (4634-5215)
               

               
               13-203, gnl|hg17|chr20 (51789992-51790526)
               

               
               13-203, gnl|Hg17|chr20 (51790350-51790540)
               

               
               13-203, gnl|loxAfr1|scaffold_6418 (71135-70601)
               

               
               13-203, gnl|mm7|chr2 (170015157-170015695)
               

               
               13-203, gnl|Mm7|chr2 (170015492-170015727)
               

               
               13-203, gnl|monDom2|scaffold_1 (165952541-165953118)
               

               
               13-203, gnl|oryCun1|scaffold_213498 (40022-40528)
               

               
               13-203, gnl|panTro1|chr21 (54567117-54567651)
               

               
               13-203, gnl|rheMac2|chr10 (10724219-10723688)
               

               
               13-203, gnl|rn3|chr3 (161173110-161173622)

Aligned organism(s): 13 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-203, gnl|bosTau2|chr13 (62321755-62321942)
               

               
               13-203, gnl|canFam2|chr24 (42532956-42533517)
               

               
               13-203, gnl|dasNov1|scaffold_16241 (4634-5215)
               

               
               13-203, gnl|hg17|chr20 (51789992-51790526)
               

               
               13-203, gnl|Hg17|chr20 (51790350-51790540)
               

               
               13-203, gnl|loxAfr1|scaffold_6418 (71135-70601)
               

               
               13-203, gnl|mm7|chr2 (170015157-170015695)
               

               
               13-203, gnl|Mm7|chr2 (170015492-170015727)
               

               
               13-203, gnl|monDom2|scaffold_1 (165952541-165953118)
               

               
               13-203, gnl|oryCun1|scaffold_213498 (40022-40528)
               

               
               13-203, gnl|panTro1|chr21 (54567117-54567651)
               

               
               13-203, gnl|rheMac2|chr10 (10724219-10723688)
               

               
               13-203, gnl|rn3|chr3 (161173110-161173622)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               amn (0.417711)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               amn (0.417711)

	13-203, gnl\|bosTau2\|chr13 (62321755-62321942)
	13-203, gnl\|canFam2\|chr24 (42532956-42533517)
	13-203, gnl\|dasNov1\|scaffold_16241 (4634-5215)
	13-203, gnl\|hg17\|chr20 (51789992-51790526)
	13-203, gnl\|Hg17\|chr20 (51790350-51790540)
	13-203, gnl\|loxAfr1\|scaffold_6418 (71135-70601)
	13-203, gnl\|mm7\|chr2 (170015157-170015695)
	13-203, gnl\|Mm7\|chr2 (170015492-170015727)
	13-203, gnl\|monDom2\|scaffold_1 (165952541-165953118)
	13-203, gnl\|oryCun1\|scaffold_213498 (40022-40528)
	13-203, gnl\|panTro1\|chr21 (54567117-54567651)
	13-203, gnl\|rheMac2\|chr10 (10724219-10723688)
	13-203, gnl\|rn3\|chr3 (161173110-161173622)