Non-Coding RNA Search

ramn3507b_f2.y1

Sequence:


               
               AACCACGAAGGGCAGGGTAGCGGCCCAGTGCCAGCCAGCCCCAGCCCCCCCGGGGGTCAG
GTGCAAAATACAAAAAGAGAACCACAAACACAGCACAGGGTGGGGGGTTGGAGATTCAAT
ACATTGCGGGTCCGTAGGGGCAGGCCCGGCTCACAGCCTCACACTCGCAGCCAGAATTCT
CCAAGATACAAATTATGAACATCTCGAATCCCTCAGGCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACCACGAAGGGCAGGGTAGCGGCCCAGTGCCAGCCAGCCCCAGCCCCCCCGGGGGTCAG
GTGCAAAATACAAAAAGAGAACCACAAACACAGCACAGGGTGGGGGGTTGGAGATTCAAT
ACATTGCGGGTCCGTAGGGGCAGGCCCGGCTCACAGCCTCACACTCGCAGCCAGAATTCT
CCAAGATACAAATTATGAACATCTCGAATCCCTCAGGCTC

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               1-219, gnl|bosTau2|chr18 (38420185-38420400)
               

               
               1-219, gnl|canFam2|chr1 (112977982-112977745)
               

               
               1-219, gnl|dasNov1|scaffold_22471 (3718-3510)
               

               
               1-219, gnl|hg17|chr19 (50669968-50670200)
               

               
               1-219, gnl|Hg17|chr19 (50670241-50670027)
               

               
               1-219, gnl|loxAfr1|scaffold_14841 (25637-25409)
               

               
               1-219, gnl|mm7|chr7 (16985395-16985153)
               

               
               1-219, gnl|Mm7|chr7 (16985108-16985335)
               

               
               1-219, gnl|monDom2|scaffold_205 (807107-806861)
               

               
               1-219, gnl|panTro1|chr20 (47855155-47855387)
               

               
               1-219, gnl|rheMac2|chr19 (51914537-51914769)
               

               
               1-219, gnl|rn3|chr1 (78744848-78744602)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-219, gnl|bosTau2|chr18 (38420185-38420400)
               

               
               1-219, gnl|canFam2|chr1 (112977982-112977745)
               

               
               1-219, gnl|dasNov1|scaffold_22471 (3718-3510)
               

               
               1-219, gnl|hg17|chr19 (50669968-50670200)
               

               
               1-219, gnl|Hg17|chr19 (50670241-50670027)
               

               
               1-219, gnl|loxAfr1|scaffold_14841 (25637-25409)
               

               
               1-219, gnl|mm7|chr7 (16985395-16985153)
               

               
               1-219, gnl|Mm7|chr7 (16985108-16985335)
               

               
               1-219, gnl|monDom2|scaffold_205 (807107-806861)
               

               
               1-219, gnl|panTro1|chr20 (47855155-47855387)
               

               
               1-219, gnl|rheMac2|chr19 (51914537-51914769)
               

               
               1-219, gnl|rn3|chr1 (78744848-78744602)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               amn (0.417711)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               amn (0.417711)

	1-219, gnl\|bosTau2\|chr18 (38420185-38420400)
	1-219, gnl\|canFam2\|chr1 (112977982-112977745)
	1-219, gnl\|dasNov1\|scaffold_22471 (3718-3510)
	1-219, gnl\|hg17\|chr19 (50669968-50670200)
	1-219, gnl\|Hg17\|chr19 (50670241-50670027)
	1-219, gnl\|loxAfr1\|scaffold_14841 (25637-25409)
	1-219, gnl\|mm7\|chr7 (16985395-16985153)
	1-219, gnl\|Mm7\|chr7 (16985108-16985335)
	1-219, gnl\|monDom2\|scaffold_205 (807107-806861)
	1-219, gnl\|panTro1\|chr20 (47855155-47855387)
	1-219, gnl\|rheMac2\|chr19 (51914537-51914769)
	1-219, gnl\|rn3\|chr1 (78744848-78744602)