Non-Coding RNA Search

raor014_d18.y1

Sequence:


               
               AATGCAAATGAAGTACAAAATACCATTTTTTTCACATCTCAAACTGGCCAAGTTTAGGAA
CAAAGTGCCTATTCTTGGCAGAGGCATGAGGAAACTGGCTTTTTCTGGCACAGAGATGGG
GAGAGCACATGGACAGCCTTCTGGAGAAAGTGTTGGTCTGGGTATCATGAACCAAAAAAT
GCACATACTCTTTGGCCCCGTAATTCTACTTCCAGGAATGCTTCCTAAGAAAACAATCAG
ATCATCAAGTAAAAGATGTTTACTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATGCAAATGAAGTACAAAATACCATTTTTTTCACATCTCAAACTGGCCAAGTTTAGGAA
CAAAGTGCCTATTCTTGGCAGAGGCATGAGGAAACTGGCTTTTTCTGGCACAGAGATGGG
GAGAGCACATGGACAGCCTTCTGGAGAAAGTGTTGGTCTGGGTATCATGAACCAAAAAAT
GCACATACTCTTTGGCCCCGTAATTCTACTTCCAGGAATGCTTCCTAAGAAAACAATCAG
ATCATCAAGTAAAAGATGTTTACTGA

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

Help | Less info


               
               1-265, gnl|bosTau2|chr4 (35566327-35566062)
               

               
               1-265, gnl|canFam2|chr14 (49151103-49151457)
               

               
               1-265, gnl|dasNov1|scaffold_7863 (61677-62063)
               

               
               1-265, gnl|echTel1|scaffold_324881 (34246-33887)
               

               
               1-265, gnl|hg17|chr7 (34030908-34031276)
               

               
               1-265, gnl|Hg17|chr7 (34031192-34030929)
               

               
               1-265, gnl|mm7|chr9 (23442496-23442851)
               

               
               1-265, gnl|Mm7|chr9 (23442777-23442517)
               

               
               1-265, gnl|oryCun1|scaffold_202645 (9870-9520)
               

               
               1-265, gnl|panTro1|chr6 (35182946-35183314)
               

               
               1-265, gnl|rheMac2|chr3 (91934070-91933701)

Aligned organism(s): 11 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-265, gnl|bosTau2|chr4 (35566327-35566062)
               

               
               1-265, gnl|canFam2|chr14 (49151103-49151457)
               

               
               1-265, gnl|dasNov1|scaffold_7863 (61677-62063)
               

               
               1-265, gnl|echTel1|scaffold_324881 (34246-33887)
               

               
               1-265, gnl|hg17|chr7 (34030908-34031276)
               

               
               1-265, gnl|Hg17|chr7 (34031192-34030929)
               

               
               1-265, gnl|mm7|chr9 (23442496-23442851)
               

               
               1-265, gnl|Mm7|chr9 (23442777-23442517)
               

               
               1-265, gnl|oryCun1|scaffold_202645 (9870-9520)
               

               
               1-265, gnl|panTro1|chr6 (35182946-35183314)
               

               
               1-265, gnl|rheMac2|chr3 (91934070-91933701)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               aor (0.195274)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)

	1-265, gnl\|bosTau2\|chr4 (35566327-35566062)
	1-265, gnl\|canFam2\|chr14 (49151103-49151457)
	1-265, gnl\|dasNov1\|scaffold_7863 (61677-62063)
	1-265, gnl\|echTel1\|scaffold_324881 (34246-33887)
	1-265, gnl\|hg17\|chr7 (34030908-34031276)
	1-265, gnl\|Hg17\|chr7 (34031192-34030929)
	1-265, gnl\|mm7\|chr9 (23442496-23442851)
	1-265, gnl\|Mm7\|chr9 (23442777-23442517)
	1-265, gnl\|oryCun1\|scaffold_202645 (9870-9520)
	1-265, gnl\|panTro1\|chr6 (35182946-35183314)
	1-265, gnl\|rheMac2\|chr3 (91934070-91933701)