Non-Coding RNA Search

raor023_a1.y1

Sequence:


               
               TTTTTTCCATATGGCATCCCTGATGCGTCTCCAGCTAAATTCCACGCTAATTGAGTAGGT
AGTGCCCTGTGTTTGCCCACATGACTTTCTGTATATCACAGTTCTTTGTCCTGTGCTTTT
CTCATTTCCAGTAGTTCTGTATTTGGAACCTCATCACCTTCCCTTTATTTGATCATTATT
AACAGCAGTAAGGTGTTATTTTCAGTTTGCCCCTATCGTATAGCTCTCTTTTTCACGTAG
GAAAATTTAATTTGAAGTTATTTTGCCACCATACAATTTTACTCTTTCAAATTTATATTT
TAATAAAAGAAAAATAATAATGATAAAAGATGAAATAATATTCATAAAGTGGGTCAAATA
TACTTACAAAATGTCTGGTAAGGATTTTCATAGTGTGGAGATTAATTTTACTCTGTTAAC
TGTACATGTAGTAAATATTTTGTGACTATTAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTCCATATGGCATCCCTGATGCGTCTCCAGCTAAATTCCACGCTAATTGAGTAGGT
AGTGCCCTGTGTTTGCCCACATGACTTTCTGTATATCACAGTTCTTTGTCCTGTGCTTTT
CTCATTTCCAGTAGTTCTGTATTTGGAACCTCATCACCTTCCCTTTATTTGATCATTATT
AACAGCAGTAAGGTGTTATTTTCAGTTTGCCCCTATCGTATAGCTCTCTTTTTCACGTAG
GAAAATTTAATTTGAAGTTATTTTGCCACCATACAATTTTACTCTTTCAAATTTATATTT
TAATAAAAGAAAAATAATAATGATAAAAGATGAAATAATATTCATAAAGTGGGTCAAATA
TACTTACAAAATGTCTGGTAAGGATTTTCATAGTGTGGAGATTAATTTTACTCTGTTAAC
TGTACATGTAGTAAATATTTTGTGACTATTAAAAAAAAAAA

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               8-175, gnl|bosTau2|chr13 (5538323-5538486)
               

               
               8-175, gnl|Hg17|chr10 (11542487-11542312)
               

               
               8-175, gnl|Mm7|chr2 (6360801-6360944)
               


               
               179-391, gnl|bosTau2|chr13 (5538716-5538937)
               

               
               179-391, gnl|Hg17|chr10 (11542297-11542094)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-175, gnl|bosTau2|chr13 (5538323-5538486)
               

               
               8-175, gnl|Hg17|chr10 (11542487-11542312)
               

               
               8-175, gnl|Mm7|chr2 (6360801-6360944)
               


               
               179-391, gnl|bosTau2|chr13 (5538716-5538937)
               

               
               179-391, gnl|Hg17|chr10 (11542297-11542094)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               aor (0.195274)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)

	8-175, gnl\|bosTau2\|chr13 (5538323-5538486)
	8-175, gnl\|Hg17\|chr10 (11542487-11542312)
	8-175, gnl\|Mm7\|chr2 (6360801-6360944)

	179-391, gnl\|bosTau2\|chr13 (5538716-5538937)
	179-391, gnl\|Hg17\|chr10 (11542297-11542094)