Non-Coding RNA Search

raor024_l13.y1

Sequence:


               
               CTCACATCCCAGATGGCTCTCTAGGCGAAGGGTGAGCTCTGCTGGCCAGGGAAGTGTGAG
AAAATGTGAAAGTACCCAGTGGCCTATAGAAGACGCCTGTGTCCAAGACGGGCAGCCAGT
GCCTTTCAACTGAATGCGATGTACTTAAAATATTTTGAAAAGAAGGCTAACAGCAGCCGC
GTGGTGGAATGTTAACGCGCTCCTTAAGATCATGTTTTCAGATACCCGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCACATCCCAGATGGCTCTCTAGGCGAAGGGTGAGCTCTGCTGGCCAGGGAAGTGTGAG
AAAATGTGAAAGTACCCAGTGGCCTATAGAAGACGCCTGTGTCCAAGACGGGCAGCCAGT
GCCTTTCAACTGAATGCGATGTACTTAAAATATTTTGAAAAGAAGGCTAACAGCAGCCGC
GTGGTGGAATGTTAACGCGCTCCTTAAGATCATGTTTTCAGATACCCGGA

Aligned organism(s): 13 entry(ies)

More info

Aligned organism(s): 13 entry(ies)

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               1-226, gnl|bosTau2|chr26 (17469714-17469941)
               

               
               1-226, gnl|canFam2|chr28 (18495074-18495269)
               

               
               1-226, gnl|dasNov1|scaffold_1510 (10165-10356)
               

               
               1-226, gnl|galGal2|chr6 (22552306-22552477)
               

               
               1-226, gnl|hg17|chr10 (104804856-104805043)
               

               
               1-226, gnl|Hg17|chr10 (104804912-104805131)
               

               
               1-226, gnl|mm7|chr19 (46758113-46758300)
               

               
               1-226, gnl|Mm7|chr19 (46758171-46758369)
               

               
               1-226, gnl|monDom2|scaffold_14 (60243628-60243445)
               

               
               1-226, gnl|oryCun1|scaffold_210383 (26383-26556)
               

               
               1-226, gnl|panTro1|chr8 (106569703-106569890)
               

               
               1-226, gnl|rheMac2|chr9 (102741187-102741374)
               

               
               1-226, gnl|rn3|chr1 (252438022-252438204)

Aligned organism(s): 13 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-226, gnl|bosTau2|chr26 (17469714-17469941)
               

               
               1-226, gnl|canFam2|chr28 (18495074-18495269)
               

               
               1-226, gnl|dasNov1|scaffold_1510 (10165-10356)
               

               
               1-226, gnl|galGal2|chr6 (22552306-22552477)
               

               
               1-226, gnl|hg17|chr10 (104804856-104805043)
               

               
               1-226, gnl|Hg17|chr10 (104804912-104805131)
               

               
               1-226, gnl|mm7|chr19 (46758113-46758300)
               

               
               1-226, gnl|Mm7|chr19 (46758171-46758369)
               

               
               1-226, gnl|monDom2|scaffold_14 (60243628-60243445)
               

               
               1-226, gnl|oryCun1|scaffold_210383 (26383-26556)
               

               
               1-226, gnl|panTro1|chr8 (106569703-106569890)
               

               
               1-226, gnl|rheMac2|chr9 (102741187-102741374)
               

               
               1-226, gnl|rn3|chr1 (252438022-252438204)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               aor (0.195274)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)

	1-226, gnl\|bosTau2\|chr26 (17469714-17469941)
	1-226, gnl\|canFam2\|chr28 (18495074-18495269)
	1-226, gnl\|dasNov1\|scaffold_1510 (10165-10356)
	1-226, gnl\|galGal2\|chr6 (22552306-22552477)
	1-226, gnl\|hg17\|chr10 (104804856-104805043)
	1-226, gnl\|Hg17\|chr10 (104804912-104805131)
	1-226, gnl\|mm7\|chr19 (46758113-46758300)
	1-226, gnl\|Mm7\|chr19 (46758171-46758369)
	1-226, gnl\|monDom2\|scaffold_14 (60243628-60243445)
	1-226, gnl\|oryCun1\|scaffold_210383 (26383-26556)
	1-226, gnl\|panTro1\|chr8 (106569703-106569890)
	1-226, gnl\|rheMac2\|chr9 (102741187-102741374)
	1-226, gnl\|rn3\|chr1 (252438022-252438204)