Non-Coding RNA Search

raor029_m4.y1

Sequence:


               
               ATCTCTCCATAAAGGCTTTCCACCTTCTCAAGCCCCATCTTGAAGTTCCTACACCACCTC
AATTATTGCCAATATTTTCTTCCCTCTCCTTAAATATGAGCCTTCCTTGAAGGTTCAATA
TCATCTCCTGCTTCTCTCTTCCACTCTACCTCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCTCTCCATAAAGGCTTTCCACCTTCTCAAGCCCCATCTTGAAGTTCCTACACCACCTC
AATTATTGCCAATATTTTCTTCCCTCTCCTTAAATATGAGCCTTCCTTGAAGGTTCAATA
TCATCTCCTGCTTCTCTCTTCCACTCTACCTCTC

Aligned organism(s): 7 entry(ies)

More info

Aligned organism(s): 7 entry(ies)

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               3-151, gnl|bosTau2|chr11 (35485955-35485808)
               

               
               3-151, gnl|hg17|chr2 (86935998-86936545)
               

               
               3-151, gnl|Hg17|chr2 (86936198-86936050)
               

               
               3-151, gnl|loxAfr1|scaffold_77738 (32807-32240)
               

               
               3-151, gnl|oryCun1|scaffold_35263 (302-786)
               

               
               3-151, gnl|panTro1|chr12 (89814698-89815245)
               

               
               3-151, gnl|rheMac2|chr13 (88410101-88410651)

Aligned organism(s): 7 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-151, gnl|bosTau2|chr11 (35485955-35485808)
               

               
               3-151, gnl|hg17|chr2 (86935998-86936545)
               

               
               3-151, gnl|Hg17|chr2 (86936198-86936050)
               

               
               3-151, gnl|loxAfr1|scaffold_77738 (32807-32240)
               

               
               3-151, gnl|oryCun1|scaffold_35263 (302-786)
               

               
               3-151, gnl|panTro1|chr12 (89814698-89815245)
               

               
               3-151, gnl|rheMac2|chr13 (88410101-88410651)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               aor (0.195274)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)

	3-151, gnl\|bosTau2\|chr11 (35485955-35485808)
	3-151, gnl\|hg17\|chr2 (86935998-86936545)
	3-151, gnl\|Hg17\|chr2 (86936198-86936050)
	3-151, gnl\|loxAfr1\|scaffold_77738 (32807-32240)
	3-151, gnl\|oryCun1\|scaffold_35263 (302-786)
	3-151, gnl\|panTro1\|chr12 (89814698-89815245)
	3-151, gnl\|rheMac2\|chr13 (88410101-88410651)