Non-Coding RNA Search

raor032_e13.y1

Sequence:


               
               TGAGTATGTATGCACTGTACAGTGTTAAAAAAGGATATTTAGTATAGAGTAAGAAGAAAC
AAATCCTAAGGGGTCAAAAAACATGATTCCCTAAAAGTGATTATAGATCATAGATTTTGG
GTTGAGAACAAAGCCTTACTGGGTTGAACAAAAAATCCAGGTAAGACTACACATCATGCT
TTGAGGGAAAAAAGTCCTCTCTTTCTTTTTCTAAAATGATCCCTTCATAAAGAATTGCCA
AATGCATCATTATTATTGACTTAAGGGGAACCTTGGAAGGTTTTGAAGATTCTCACAATG
TGATAGTAATCTTTGTAACACACACGAAGGTAGTTATATGTGTTAGCTGTATGGGAACAT
GGCACCCAGTGGACAATGAATAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAGTATGTATGCACTGTACAGTGTTAAAAAAGGATATTTAGTATAGAGTAAGAAGAAAC
AAATCCTAAGGGGTCAAAAAACATGATTCCCTAAAAGTGATTATAGATCATAGATTTTGG
GTTGAGAACAAAGCCTTACTGGGTTGAACAAAAAATCCAGGTAAGACTACACATCATGCT
TTGAGGGAAAAAAGTCCTCTCTTTCTTTTTCTAAAATGATCCCTTCATAAAGAATTGCCA
AATGCATCATTATTATTGACTTAAGGGGAACCTTGGAAGGTTTTGAAGATTCTCACAATG
TGATAGTAATCTTTGTAACACACACGAAGGTAGTTATATGTGTTAGCTGTATGGGAACAT
GGCACCCAGTGGACAATGAATAAG

Aligned organism(s): 13 entry(ies)

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Aligned organism(s): 13 entry(ies)

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               112-383, gnl|bosTau2|chr11 (48366859-48367128)
               

               
               112-383, gnl|canFam2|chr10 (71718197-71718512)
               

               
               112-383, gnl|dasNov1|scaffold_179886 (279-4)
               

               
               112-383, gnl|hg17|chr2 (70066442-70066739)
               

               
               112-383, gnl|Hg17|chr2 (70066824-70066564)
               

               
               112-383, gnl|loxAfr1|scaffold_40721 (9108-9457)
               

               
               112-383, gnl|mm7|chr6 (86733528-86733259)
               

               
               112-383, gnl|Mm7|chr6 (86733197-86733421)
               

               
               112-383, gnl|monDom2|scaffold_1 (93293906-93294135)
               

               
               112-383, gnl|oryCun1|scaffold_210821 (77462-77167)
               

               
               112-383, gnl|panTro1|chr12 (72331457-72331754)
               

               
               112-383, gnl|rheMac2|chr13 (70183217-70183514)
               

               
               112-383, gnl|rn3|chr4 (121055012-121054744)

Aligned organism(s): 13 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               112-383, gnl|bosTau2|chr11 (48366859-48367128)
               

               
               112-383, gnl|canFam2|chr10 (71718197-71718512)
               

               
               112-383, gnl|dasNov1|scaffold_179886 (279-4)
               

               
               112-383, gnl|hg17|chr2 (70066442-70066739)
               

               
               112-383, gnl|Hg17|chr2 (70066824-70066564)
               

               
               112-383, gnl|loxAfr1|scaffold_40721 (9108-9457)
               

               
               112-383, gnl|mm7|chr6 (86733528-86733259)
               

               
               112-383, gnl|Mm7|chr6 (86733197-86733421)
               

               
               112-383, gnl|monDom2|scaffold_1 (93293906-93294135)
               

               
               112-383, gnl|oryCun1|scaffold_210821 (77462-77167)
               

               
               112-383, gnl|panTro1|chr12 (72331457-72331754)
               

               
               112-383, gnl|rheMac2|chr13 (70183217-70183514)
               

               
               112-383, gnl|rn3|chr4 (121055012-121054744)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               aor (0.195274)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)

	112-383, gnl\|bosTau2\|chr11 (48366859-48367128)
	112-383, gnl\|canFam2\|chr10 (71718197-71718512)
	112-383, gnl\|dasNov1\|scaffold_179886 (279-4)
	112-383, gnl\|hg17\|chr2 (70066442-70066739)
	112-383, gnl\|Hg17\|chr2 (70066824-70066564)
	112-383, gnl\|loxAfr1\|scaffold_40721 (9108-9457)
	112-383, gnl\|mm7\|chr6 (86733528-86733259)
	112-383, gnl\|Mm7\|chr6 (86733197-86733421)
	112-383, gnl\|monDom2\|scaffold_1 (93293906-93294135)
	112-383, gnl\|oryCun1\|scaffold_210821 (77462-77167)
	112-383, gnl\|panTro1\|chr12 (72331457-72331754)
	112-383, gnl\|rheMac2\|chr13 (70183217-70183514)
	112-383, gnl\|rn3\|chr4 (121055012-121054744)