Non-Coding RNA Search

raor032_i13.y1

Sequence:


               
               CATGAGATAAATATCCCAGGCAGAGACTCTATAAGTACCAGAGTGTACAGAGAGCTGGAT
GAGGGCAAGAACGGGTCTGTTTTCTTGCATTGTTTCATTAGCATCTAGTCGAGATGGTGA
CTCATAAATGCTCCAAGTGCACTCAAGAGAAAAAGAAATATACCTTTGGACCCTACACAC
ATATGGTCAAGTAAAACCAATTATCTCATTTATTCAAACAACTATTACTATACTTTTCCA
ATAATCTTGAGTAATTCAGCCATCTAGAAAGGTATTCTGATATCAGTAATTCTGCAGAGT
TTATAGTAAGAGGTCTTTTGTTTTTTGGTTGTTGTTTTTTGTTTTTGTTTTTTTTGCTTT
CTACAGCCACACCTGTGCCATATGGAAGTTCCCAGGCCTACACCAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATGAGATAAATATCCCAGGCAGAGACTCTATAAGTACCAGAGTGTACAGAGAGCTGGAT
GAGGGCAAGAACGGGTCTGTTTTCTTGCATTGTTTCATTAGCATCTAGTCGAGATGGTGA
CTCATAAATGCTCCAAGTGCACTCAAGAGAAAAAGAAATATACCTTTGGACCCTACACAC
ATATGGTCAAGTAAAACCAATTATCTCATTTATTCAAACAACTATTACTATACTTTTCCA
ATAATCTTGAGTAATTCAGCCATCTAGAAAGGTATTCTGATATCAGTAATTCTGCAGAGT
TTATAGTAAGAGGTCTTTTGTTTTTTGGTTGTTGTTTTTTGTTTTTGTTTTTTTTGCTTT
CTACAGCCACACCTGTGCCATATGGAAGTTCCCAGGCCTACACCAC

Aligned organism(s): 9 entry(ies)

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Aligned organism(s): 9 entry(ies)

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               129-325, gnl|bosTau2|chr17 (10455012-10455207)
               

               
               129-325, gnl|canFam2|chr19 (4650788-4650586)
               

               
               129-325, gnl|echTel1|scaffold_304537 (5523-5319)
               

               
               129-325, gnl|hg17|chr4 (142610157-142610369)
               

               
               129-325, gnl|Hg17|chr4 (142610362-142610158)
               

               
               129-325, gnl|loxAfr1|scaffold_40713 (23034-22821)
               

               
               129-325, gnl|oryCun1|scaffold_129581 (8849-9059)
               

               
               129-325, gnl|panTro1|chr3 (159867592-159867806)
               

               
               129-325, gnl|rheMac2|chr5 (133785272-133785484)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               129-325, gnl|bosTau2|chr17 (10455012-10455207)
               

               
               129-325, gnl|canFam2|chr19 (4650788-4650586)
               

               
               129-325, gnl|echTel1|scaffold_304537 (5523-5319)
               

               
               129-325, gnl|hg17|chr4 (142610157-142610369)
               

               
               129-325, gnl|Hg17|chr4 (142610362-142610158)
               

               
               129-325, gnl|loxAfr1|scaffold_40713 (23034-22821)
               

               
               129-325, gnl|oryCun1|scaffold_129581 (8849-9059)
               

               
               129-325, gnl|panTro1|chr3 (159867592-159867806)
               

               
               129-325, gnl|rheMac2|chr5 (133785272-133785484)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               aor (0.195274)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)

	129-325, gnl\|bosTau2\|chr17 (10455012-10455207)
	129-325, gnl\|canFam2\|chr19 (4650788-4650586)
	129-325, gnl\|echTel1\|scaffold_304537 (5523-5319)
	129-325, gnl\|hg17\|chr4 (142610157-142610369)
	129-325, gnl\|Hg17\|chr4 (142610362-142610158)
	129-325, gnl\|loxAfr1\|scaffold_40713 (23034-22821)
	129-325, gnl\|oryCun1\|scaffold_129581 (8849-9059)
	129-325, gnl\|panTro1\|chr3 (159867592-159867806)
	129-325, gnl\|rheMac2\|chr5 (133785272-133785484)