Non-Coding RNA Search

raor033_o23.y1

Sequence:


               
               GGAATCCCCACAGCAATTAGAACGACAGTTGACAGACCGAAGGACTGGTACAAGACCATG
TTGAAGCAAATCCACATGGTGCACAAGCCAGATGATGACACAGACATGTATAATACTCCT
TATACATATAATGCAGGCCTGTACAACTCACCCTACAGTGCTCAGTCACATCCTGCTGCC
AAGACCCAGACCTACAGACCCCTCTCCAGAGAGCCACTCTGACAATGGCACCGACGCCTT
TAAGGATGCTTCCTCACCTGTCCCTCCCCCACATGTTCCTCCTCCAGTCCCACCTCTGCG
ACCAAGAGATCGGTCTTCAACAGAAAAGCATGACTGGGATCCTCCAGACAGAAAAGTGGA
CACGAGAAAATTTCGTTCTGAGCCAAGGAGTATTTTTGAATATGAACCTGGGAAATCATC
AATTCTGCAGCATGAAAGACCAGTAAGCACTTGTCATTAATCAGAATGTCAGTTTTCTAG
GTCTCCTGGGTTTCCAAATAAATCTGAATTTCATATTTTTTAGCAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAATCCCCACAGCAATTAGAACGACAGTTGACAGACCGAAGGACTGGTACAAGACCATG
TTGAAGCAAATCCACATGGTGCACAAGCCAGATGATGACACAGACATGTATAATACTCCT
TATACATATAATGCAGGCCTGTACAACTCACCCTACAGTGCTCAGTCACATCCTGCTGCC
AAGACCCAGACCTACAGACCCCTCTCCAGAGAGCCACTCTGACAATGGCACCGACGCCTT
TAAGGATGCTTCCTCACCTGTCCCTCCCCCACATGTTCCTCCTCCAGTCCCACCTCTGCG
ACCAAGAGATCGGTCTTCAACAGAAAAGCATGACTGGGATCCTCCAGACAGAAAAGTGGA
CACGAGAAAATTTCGTTCTGAGCCAAGGAGTATTTTTGAATATGAACCTGGGAAATCATC
AATTCTGCAGCATGAAAGACCAGTAAGCACTTGTCATTAATCAGAATGTCAGTTTTCTAG
GTCTCCTGGGTTTCCAAATAAATCTGAATTTCATATTTTTTAGCAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|15029374|gb|AAK81861.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|15029374|gb|AAK81861.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               328-526, gnl|bosTau2|chr27 (9302190-9302388)
               

               
               328-526, gnl|Hg17|chr4 (186943085-186942885)
               

               
               328-526, gnl|Mm7|chr8 (44553446-44553631)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               328-526, gnl|bosTau2|chr27 (9302190-9302388)
               

               
               328-526, gnl|Hg17|chr4 (186943085-186942885)
               

               
               328-526, gnl|Mm7|chr8 (44553446-44553631)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               aor (0.195274)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)

	328-526, gnl\|bosTau2\|chr27 (9302190-9302388)
	328-526, gnl\|Hg17\|chr4 (186943085-186942885)
	328-526, gnl\|Mm7\|chr8 (44553446-44553631)