Non-Coding RNA Search

rcad18b_e1.y1

Sequence:


               
               TCAGTCACAGCGAACGCATCATCACGAGATGAGATGGGGAGAGCGTCTGCTGGGGGCGTA
ATAAGACCGAACAGGCTCTCTCCATAGGTGGAGTAAAGCGAGAAGAAGCCCCGCCGGCAC
ACTCCTCCGGAAAACTGAAGCATCTTCTTTAACCTCGGGGTCAGAAAGATTTATTACTTC
CTCGGTGAGCGAGAAGCCTCAGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCAGTCACAGCGAACGCATCATCACGAGATGAGATGGGGAGAGCGTCTGCTGGGGGCGTA
ATAAGACCGAACAGGCTCTCTCCATAGGTGGAGTAAAGCGAGAAGAAGCCCCGCCGGCAC
ACTCCTCCGGAAAACTGAAGCATCTTCTTTAACCTCGGGGTCAGAAAGATTTATTACTTC
CTCGGTGAGCGAGAAGCCTCAGGC

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

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               1-204, gnl|bosTau2|chr1 (78740141-78740347)
               

               
               1-204, gnl|canFam2|chr23 (41747798-41748208)
               

               
               1-204, gnl|hg17|chr3 (144320385-144320794)
               

               
               1-204, gnl|Hg17|chr3 (144320586-144320800)
               

               
               1-204, gnl|loxAfr1|scaffold_13373 (38632-39042)
               

               
               1-204, gnl|mm7|chr9 (95054020-95053647)
               

               
               1-204, gnl|Mm7|chr9 (95053833-95053639)
               

               
               1-204, gnl|oryCun1|scaffold_202080 (87216-87626)
               

               
               1-204, gnl|panTro1|chr2 (146898303-146898697)
               

               
               1-204, gnl|rheMac2|chr2 (144753123-144752723)
               

               
               1-204, gnl|rn3|chr8 (100521850-100521473)

Aligned organism(s): 11 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-204, gnl|bosTau2|chr1 (78740141-78740347)
               

               
               1-204, gnl|canFam2|chr23 (41747798-41748208)
               

               
               1-204, gnl|hg17|chr3 (144320385-144320794)
               

               
               1-204, gnl|Hg17|chr3 (144320586-144320800)
               

               
               1-204, gnl|loxAfr1|scaffold_13373 (38632-39042)
               

               
               1-204, gnl|mm7|chr9 (95054020-95053647)
               

               
               1-204, gnl|Mm7|chr9 (95053833-95053639)
               

               
               1-204, gnl|oryCun1|scaffold_202080 (87216-87626)
               

               
               1-204, gnl|panTro1|chr2 (146898303-146898697)
               

               
               1-204, gnl|rheMac2|chr2 (144753123-144752723)
               

               
               1-204, gnl|rn3|chr8 (100521850-100521473)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cag (0.151194)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cag (0.151194)

	1-204, gnl\|bosTau2\|chr1 (78740141-78740347)
	1-204, gnl\|canFam2\|chr23 (41747798-41748208)
	1-204, gnl\|hg17\|chr3 (144320385-144320794)
	1-204, gnl\|Hg17\|chr3 (144320586-144320800)
	1-204, gnl\|loxAfr1\|scaffold_13373 (38632-39042)
	1-204, gnl\|mm7\|chr9 (95054020-95053647)
	1-204, gnl\|Mm7\|chr9 (95053833-95053639)
	1-204, gnl\|oryCun1\|scaffold_202080 (87216-87626)
	1-204, gnl\|panTro1\|chr2 (146898303-146898697)
	1-204, gnl\|rheMac2\|chr2 (144753123-144752723)
	1-204, gnl\|rn3\|chr8 (100521850-100521473)