Non-Coding RNA Search

rcbe08_j24.y1

Sequence:


               
               TTTTAAAAAATTAGAAGAAAAAAAGCTGTTCTCTGTCTAGAGAGACAAAGTAGAATAGAG
GTTACCATGAGCTGAGGGAGGGGGTGTTGAAGGAGAGAAGAGCGAGTTACTGTTTCAAGG
GTACGGAGGTTTTGCTGGGGATGATGAAAGTTTTGGGGTATAGATGATGGTGAAGGTTAC
TCAACATTGTGGATTTAATTTATTTGATGCCACCCAATTGTACACTCAACAGATGGTTAA
AATGATAAATATTATGCTATGCATTCTACCACAATAAAAACGACAATAACTTTTCCAAAA
AAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTAAAAAATTAGAAGAAAAAAAGCTGTTCTCTGTCTAGAGAGACAAAGTAGAATAGAG
GTTACCATGAGCTGAGGGAGGGGGTGTTGAAGGAGAGAAGAGCGAGTTACTGTTTCAAGG
GTACGGAGGTTTTGCTGGGGATGATGAAAGTTTTGGGGTATAGATGATGGTGAAGGTTAC
TCAACATTGTGGATTTAATTTATTTGATGCCACCCAATTGTACACTCAACAGATGGTTAA
AATGATAAATATTATGCTATGCATTCTACCACAATAAAAACGACAATAACTTTTCCAAAA
AAAAAAAAAAAAAAAA

Aligned organism(s): 10 entry(ies)

More info

Aligned organism(s): 10 entry(ies)

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               23-273, gnl|bosTau2|chr23 (9256433-9256191)
               

               
               23-273, gnl|canFam2|chr12 (7314819-7315111)
               

               
               23-273, gnl|hg17|chr6 (35223520-35223793)
               

               
               23-273, gnl|Hg17|chr6 (35223800-35223556)
               

               
               23-273, gnl|mm7|chr17 (26271921-26272199)
               

               
               23-273, gnl|Mm7|chr17 (26272189-26271959)
               

               
               23-273, gnl|oryCun1|scaffold_212589 (229868-229614)
               

               
               23-273, gnl|panTro1|chr5 (35680242-35680515)
               

               
               23-273, gnl|rheMac2|chr4 (34866139-34866427)
               

               
               23-273, gnl|rn3|chr20 (6299985-6300242)

Aligned organism(s): 10 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               23-273, gnl|bosTau2|chr23 (9256433-9256191)
               

               
               23-273, gnl|canFam2|chr12 (7314819-7315111)
               

               
               23-273, gnl|hg17|chr6 (35223520-35223793)
               

               
               23-273, gnl|Hg17|chr6 (35223800-35223556)
               

               
               23-273, gnl|mm7|chr17 (26271921-26272199)
               

               
               23-273, gnl|Mm7|chr17 (26272189-26271959)
               

               
               23-273, gnl|oryCun1|scaffold_212589 (229868-229614)
               

               
               23-273, gnl|panTro1|chr5 (35680242-35680515)
               

               
               23-273, gnl|rheMac2|chr4 (34866139-34866427)
               

               
               23-273, gnl|rn3|chr20 (6299985-6300242)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cbe (0.239234)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbe (0.239234)

	23-273, gnl\|bosTau2\|chr23 (9256433-9256191)
	23-273, gnl\|canFam2\|chr12 (7314819-7315111)
	23-273, gnl\|hg17\|chr6 (35223520-35223793)
	23-273, gnl\|Hg17\|chr6 (35223800-35223556)
	23-273, gnl\|mm7\|chr17 (26271921-26272199)
	23-273, gnl\|Mm7\|chr17 (26272189-26271959)
	23-273, gnl\|oryCun1\|scaffold_212589 (229868-229614)
	23-273, gnl\|panTro1\|chr5 (35680242-35680515)
	23-273, gnl\|rheMac2\|chr4 (34866139-34866427)
	23-273, gnl\|rn3\|chr20 (6299985-6300242)