Non-Coding RNA Search

rcbe09_j19.y1

Sequence:


               
               GATTGATGACAAAGTACTCGGCATCAAAGAAAACAAAATCAAACAATCCCAGACATACCA
TTGACATATTTTTTAAATGAATATTGAACATTTTATCTTTAACCTTTGATTGAAACTTGT
TACTTTATAATCAATGAATGTATTCTTGGTTATTTCAAGTTTACATGTTCATTTAGTGAA
AGGCAAGTGCAATAATCCCTCCCTAAATGACATTTTTTATAGGAATTTGAAATATACTAA
TTTACTTCTGTATATTTTTTTAATGACCATGAGAATTTCACTTCCATTATCCTTCAGTTG
GAAATCATTCCTGTTGGAGATAATTTTTAAATGAGAAATTAGTAATGGGATCAGAAAGTG
ATTTATTGCCTCATGATATTTTATAGTGAATATAAAAACATATGTTTAggagttctcgtc
atggctcagcggaaaatgaatctgactagcatccatgaggagacaggttcgatccctggc
ctcactcaatgggttaaggatctgatgttgccatgagctgtgatgtaggtcacaagatgc
agctcggatccggcgttATAAGGGCTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATTGATGACAAAGTACTCGGCATCAAAGAAAACAAAATCAAACAATCCCAGACATACCA
TTGACATATTTTTTAAATGAATATTGAACATTTTATCTTTAACCTTTGATTGAAACTTGT
TACTTTATAATCAATGAATGTATTCTTGGTTATTTCAAGTTTACATGTTCATTTAGTGAA
AGGCAAGTGCAATAATCCCTCCCTAAATGACATTTTTTATAGGAATTTGAAATATACTAA
TTTACTTCTGTATATTTTTTTAATGACCATGAGAATTTCACTTCCATTATCCTTCAGTTG
GAAATCATTCCTGTTGGAGATAATTTTTAAATGAGAAATTAGTAATGGGATCAGAAAGTG
ATTTATTGCCTCATGATATTTTATAGTGAATATAAAAACATATGTTTAggagttctcgtc
atggctcagcggaaaatgaatctgactagcatccatgaggagacaggttcgatccctggc
ctcactcaatgggttaaggatctgatgttgccatgagctgtgatgtaggtcacaagatgc
agctcggatccggcgttATAAGGGCTCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-408, gnl|bosTau2|chr10 (1630126-1629741)
               

               
               1-408, gnl|Hg17|chr5 (74929520-74929912)
               

               
               1-408, gnl|Mm7|chr13 (93551606-93551221)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-408, gnl|bosTau2|chr10 (1630126-1629741)
               

               
               1-408, gnl|Hg17|chr5 (74929520-74929912)
               

               
               1-408, gnl|Mm7|chr13 (93551606-93551221)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbe (0.239234)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbe (0.239234)

	1-408, gnl\|bosTau2\|chr10 (1630126-1629741)
	1-408, gnl\|Hg17\|chr5 (74929520-74929912)
	1-408, gnl\|Mm7\|chr13 (93551606-93551221)