rcbe27_h4.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTTCCAGCTTTTTAACCACTGTATCTTTCTAAGGTATAAATGTAAAATTATTTTAATATT ATTCTTCATCTCACTGAATGAGATCACCCTAGAAAAATAAGGTGGAAGATGCCTAATTAT TACTTTTTCAAATTAATTTCTGAGTTTCtggttcagtaggttaagggtcctgcattgtca ctgctgtggctctggttactgctgtggcacaggtttgatccctggtctgggaacttcttc atgcTTAGATGCAGCCAAAAAAACAAAACAAAACAAAAAAATTAATTTCAGATTCTTTTG TATATTTAAAAAAATTTTAGTATCACATTGAGTTTTTTCACCTTTTCTCACTTTTAAAAT TACTACAAGTAGTTCCTGTTCTGCTTAAAGTTTTATTTATCTTTTACTGATAACTTTCCT T |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTTCCAGCTTTTTAACCACTGTATCTTTCTAAGGTATAAATGTAAAATTATTTTAATATT ATTCTTCATCTCACTGAATGAGATCACCCTAGAAAAATAAGGTGGAAGATGCCTAATTAT TACTTTTTCAAATTAATTTCTGAGTTTCtggttcagtaggttaagggtcctgcattgtca ctgctgtggctctggttactgctgtggcacaggtttgatccctggtctgggaacttcttc atgcTTAGATGCAGCCAAAAAAACAAAACAAAACAAAAAAATTAATTTCAGATTCTTTTG TATATTTAAAAAAATTTTAGTATCACATTGAGTTTTTTCACCTTTTCTCACTTTTAAAAT TACTACAAGTAGTTCCTGTTCTGCTTAAAGTTTTATTTATCTTTTACTGATAACTTTCCT T |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 1-114, - strand, RNAz p=0.624844 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1-114, - strand, RNAz p=0.624844 |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 1-140, gnl|bosTau2|chr6 (32387130-32387266) | |
| 1-140, gnl|canFam2|chr3 (94103179-94102356) | |
| 1-140, gnl|dasNov1|scaffold_4325 (26084-25286) | |
| 1-140, gnl|echTel1|scaffold_321426 (44627-45495) | |
| 1-140, gnl|hg17|chr4 (17548714-17549537) | |
| 1-140, gnl|Hg17|chr4 (17549443-17549299) | |
| 1-140, gnl|loxAfr1|scaffold_3935 (90532-91363) | |
| 1-140, gnl|mm7|chr5 (45042905-45043701) | |
| 1-140, gnl|Mm7|chr5 (45043618-45043480) | |
| 1-140, gnl|monDom2|scaffold_10 (21759236-21758444) | |
| 1-140, gnl|oryCun1|scaffold_177533 (68369-67560) | |
| 1-140, gnl|panTro1|chr3 (17903064-17903890) | |
| 1-140, gnl|rheMac2|chr5 (12688289-12689116) | |
| 1-140, gnl|rn3|chr14 (70447146-70446340) | |
| 279-421, gnl|bosTau2|chr6 (32387256-32387403) | |
| 279-421, gnl|canFam2|chr3 (94103179-94102356) | |
| 279-421, gnl|dasNov1|scaffold_4325 (26084-25286) | |
| 279-421, gnl|echTel1|scaffold_321426 (44627-45495) | |
| 279-421, gnl|hg17|chr4 (17548714-17549537) | |
| 279-421, gnl|Hg17|chr4 (17549309-17549163) | |
| 279-421, gnl|loxAfr1|scaffold_3935 (90532-91363) | |
| 279-421, gnl|mm7|chr5 (45042905-45043701) | |
| 279-421, gnl|Mm7|chr5 (45043490-45043348) | |
| 279-421, gnl|monDom2|scaffold_10 (21759236-21758444) | |
| 279-421, gnl|oryCun1|scaffold_177533 (68369-67560) | |
| 279-421, gnl|panTro1|chr3 (17903064-17903890) | |
| 279-421, gnl|rheMac2|chr5 (12688289-12689116) | |
| 279-421, gnl|rn3|chr14 (70447146-70446340) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-140, gnl|bosTau2|chr6 (32387130-32387266) | |
| 1-140, gnl|canFam2|chr3 (94103179-94102356) | |
| 1-140, gnl|dasNov1|scaffold_4325 (26084-25286) | |
| 1-140, gnl|echTel1|scaffold_321426 (44627-45495) | |
| 1-140, gnl|hg17|chr4 (17548714-17549537) | |
| 1-140, gnl|Hg17|chr4 (17549443-17549299) | |
| 1-140, gnl|loxAfr1|scaffold_3935 (90532-91363) | |
| 1-140, gnl|mm7|chr5 (45042905-45043701) | |
| 1-140, gnl|Mm7|chr5 (45043618-45043480) | |
| 1-140, gnl|monDom2|scaffold_10 (21759236-21758444) | |
| 1-140, gnl|oryCun1|scaffold_177533 (68369-67560) | |
| 1-140, gnl|panTro1|chr3 (17903064-17903890) | |
| 1-140, gnl|rheMac2|chr5 (12688289-12689116) | |
| 1-140, gnl|rn3|chr14 (70447146-70446340) | |
| 279-421, gnl|bosTau2|chr6 (32387256-32387403) | |
| 279-421, gnl|canFam2|chr3 (94103179-94102356) | |
| 279-421, gnl|dasNov1|scaffold_4325 (26084-25286) | |
| 279-421, gnl|echTel1|scaffold_321426 (44627-45495) | |
| 279-421, gnl|hg17|chr4 (17548714-17549537) | |
| 279-421, gnl|Hg17|chr4 (17549309-17549163) | |
| 279-421, gnl|loxAfr1|scaffold_3935 (90532-91363) | |
| 279-421, gnl|mm7|chr5 (45042905-45043701) | |
| 279-421, gnl|Mm7|chr5 (45043490-45043348) | |
| 279-421, gnl|monDom2|scaffold_10 (21759236-21758444) | |
| 279-421, gnl|oryCun1|scaffold_177533 (68369-67560) | |
| 279-421, gnl|panTro1|chr3 (17903064-17903890) | |
| 279-421, gnl|rheMac2|chr5 (12688289-12689116) | |
| 279-421, gnl|rn3|chr14 (70447146-70446340) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cbe (0.239234) |