Non-Coding RNA Search

rcbl0_004041.y1

Sequence:


               
               CACCTGAACACAAATCTAAGCTCTGTCACTTAGTAGCATGGTCACCCTGACAAATAAATA
AATCTCTCTGAGGCTTAGTTTGCTCACTTACAAAAACTAGAGTTGCAGTACCTATTACAC
AAGGTACGTGCAAGGATTAAGTGAGATTATGTATCTAAAGTCCTTAGCACAAGCATTAAC
TTTCTTTCTGTAGGTGGTAGGGAAGATATAGAAAGGAATAGATATTATCTTTATTTCTAA
GAGTTTACAGTCTAACTGGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACCTGAACACAAATCTAAGCTCTGTCACTTAGTAGCATGGTCACCCTGACAAATAAATA
AATCTCTCTGAGGCTTAGTTTGCTCACTTACAAAAACTAGAGTTGCAGTACCTATTACAC
AAGGTACGTGCAAGGATTAAGTGAGATTATGTATCTAAAGTCCTTAGCACAAGCATTAAC
TTTCTTTCTGTAGGTGGTAGGGAAGATATAGAAAGGAATAGATATTATCTTTATTTCTAA
GAGTTTACAGTCTAACTGGAG

Aligned organism(s): 8 entry(ies)

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Aligned organism(s): 8 entry(ies)

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               1-261, gnl|bosTau2|chr11 (13406886-13407148)
               

               
               1-261, gnl|canFam2|chr10 (49786734-49787044)
               

               
               1-261, gnl|dasNov1|scaffold_2214 (10485-10311)
               

               
               1-261, gnl|hg17|chr2 (44363793-44364107)
               

               
               1-261, gnl|Hg17|chr2 (44363805-44364067)
               

               
               1-261, gnl|mm7|chr17 (83307135-83307374)
               

               
               1-261, gnl|panTro1|chr12 (46038615-46038929)
               

               
               1-261, gnl|rheMac2|chr13 (44355026-44355337)

Aligned organism(s): 8 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-261, gnl|bosTau2|chr11 (13406886-13407148)
               

               
               1-261, gnl|canFam2|chr10 (49786734-49787044)
               

               
               1-261, gnl|dasNov1|scaffold_2214 (10485-10311)
               

               
               1-261, gnl|hg17|chr2 (44363793-44364107)
               

               
               1-261, gnl|Hg17|chr2 (44363805-44364067)
               

               
               1-261, gnl|mm7|chr17 (83307135-83307374)
               

               
               1-261, gnl|panTro1|chr12 (46038615-46038929)
               

               
               1-261, gnl|rheMac2|chr13 (44355026-44355337)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbl (0.114797)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.114797)

	1-261, gnl\|bosTau2\|chr11 (13406886-13407148)
	1-261, gnl\|canFam2\|chr10 (49786734-49787044)
	1-261, gnl\|dasNov1\|scaffold_2214 (10485-10311)
	1-261, gnl\|hg17\|chr2 (44363793-44364107)
	1-261, gnl\|Hg17\|chr2 (44363805-44364067)
	1-261, gnl\|mm7\|chr17 (83307135-83307374)
	1-261, gnl\|panTro1\|chr12 (46038615-46038929)
	1-261, gnl\|rheMac2\|chr13 (44355026-44355337)