Non-Coding RNA Search

rcbl0_010466.y1

Sequence:


               
               AATTCCATGAAAGTCTTAACATTTCAAACATAAAAATTCTACATATGTTTGATTTCTGAA
AAGGCTAGAACTGTGGGGAAATAAGGTTTTGCTAATGGTGATGTCATCGAGGTAACCATT
CCACATATTTATTAATGTGTCAAAGGATTTATGTAAATTTGAAGCTAATCTGAACTAAAT
TGTATCTTGAAATTCATAAAAGGATATATTAGATACTGGGATCCTAACATTTCTGTGAAC
GTAAACACATTCATAGAGATAAGTATTCTTGATGAAAATATCTTGAGAATGGAGTGTAAT
GATACAACATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATTCCATGAAAGTCTTAACATTTCAAACATAAAAATTCTACATATGTTTGATTTCTGAA
AAGGCTAGAACTGTGGGGAAATAAGGTTTTGCTAATGGTGATGTCATCGAGGTAACCATT
CCACATATTTATTAATGTGTCAAAGGATTTATGTAAATTTGAAGCTAATCTGAACTAAAT
TGTATCTTGAAATTCATAAAAGGATATATTAGATACTGGGATCCTAACATTTCTGTGAAC
GTAAACACATTCATAGAGATAAGTATTCTTGATGAAAATATCTTGAGAATGGAGTGTAAT
GATACAACATT

Aligned organism(s): 15 entry(ies)

More info

Aligned organism(s): 15 entry(ies)

Help | Less info


               
               1-304, gnl|bosTau2|chr14 (19064594-19064902)
               

               
               1-304, gnl|canFam2|chr29 (19210861-19211704)
               

               
               1-304, gnl|dasNov1|scaffold_71691 (1784-2646)
               

               
               1-304, gnl|echTel1|scaffold_309102 (4652-3803)
               

               
               1-304, gnl|galGal2|chr2 (114661673-114662588)
               

               
               1-304, gnl|hg17|chr8 (67708294-67709083)
               

               
               1-304, gnl|Hg17|chr8 (67709014-67708716)
               

               
               1-304, gnl|loxAfr1|scaffold_259 (51989-51146)
               

               
               1-304, gnl|mm7|chr1 (9866231-9867001)
               

               
               1-304, gnl|Mm7|chr1 (9866934-9866673)
               

               
               1-304, gnl|monDom2|scaffold_4 (94881334-94880465)
               

               
               1-304, gnl|oryCun1|scaffold_215358 (95872-95036)
               

               
               1-304, gnl|panTro1|chr7 (69723141-69723929)
               

               
               1-304, gnl|rheMac2|chr8 (69263743-69264542)
               

               
               1-304, gnl|rn3|chr5 (9115835-9115064)

Aligned organism(s): 15 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-304, gnl|bosTau2|chr14 (19064594-19064902)
               

               
               1-304, gnl|canFam2|chr29 (19210861-19211704)
               

               
               1-304, gnl|dasNov1|scaffold_71691 (1784-2646)
               

               
               1-304, gnl|echTel1|scaffold_309102 (4652-3803)
               

               
               1-304, gnl|galGal2|chr2 (114661673-114662588)
               

               
               1-304, gnl|hg17|chr8 (67708294-67709083)
               

               
               1-304, gnl|Hg17|chr8 (67709014-67708716)
               

               
               1-304, gnl|loxAfr1|scaffold_259 (51989-51146)
               

               
               1-304, gnl|mm7|chr1 (9866231-9867001)
               

               
               1-304, gnl|Mm7|chr1 (9866934-9866673)
               

               
               1-304, gnl|monDom2|scaffold_4 (94881334-94880465)
               

               
               1-304, gnl|oryCun1|scaffold_215358 (95872-95036)
               

               
               1-304, gnl|panTro1|chr7 (69723141-69723929)
               

               
               1-304, gnl|rheMac2|chr8 (69263743-69264542)
               

               
               1-304, gnl|rn3|chr5 (9115835-9115064)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cbl (0.114797)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.114797)

	1-304, gnl\|bosTau2\|chr14 (19064594-19064902)
	1-304, gnl\|canFam2\|chr29 (19210861-19211704)
	1-304, gnl\|dasNov1\|scaffold_71691 (1784-2646)
	1-304, gnl\|echTel1\|scaffold_309102 (4652-3803)
	1-304, gnl\|galGal2\|chr2 (114661673-114662588)
	1-304, gnl\|hg17\|chr8 (67708294-67709083)
	1-304, gnl\|Hg17\|chr8 (67709014-67708716)
	1-304, gnl\|loxAfr1\|scaffold_259 (51989-51146)
	1-304, gnl\|mm7\|chr1 (9866231-9867001)
	1-304, gnl\|Mm7\|chr1 (9866934-9866673)
	1-304, gnl\|monDom2\|scaffold_4 (94881334-94880465)
	1-304, gnl\|oryCun1\|scaffold_215358 (95872-95036)
	1-304, gnl\|panTro1\|chr7 (69723141-69723929)
	1-304, gnl\|rheMac2\|chr8 (69263743-69264542)
	1-304, gnl\|rn3\|chr5 (9115835-9115064)