Non-Coding RNA Search

rcbl0_011243.y1

Sequence:


               
               AAAAGATGCCGCCCTCTTGTGAAGAAAACCCACTTGGTTGCAGAGCCCACTTTTGTAGCT
TTGATTTCCTGTCGTGACGTGGTGTGTGCGTTTCACTCTCAAGCGATGGACAAAGAGCTC
TGACTTTCCATTCCAGTGGATTGACCTCAGATAACACAGTGGCCTCTTTAGACGCAGAAG
TGTACCCAGAGCATTCATTTCAGGTGGACTCACCTGCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAGATGCCGCCCTCTTGTGAAGAAAACCCACTTGGTTGCAGAGCCCACTTTTGTAGCT
TTGATTTCCTGTCGTGACGTGGTGTGTGCGTTTCACTCTCAAGCGATGGACAAAGAGCTC
TGACTTTCCATTCCAGTGGATTGACCTCAGATAACACAGTGGCCTCTTTAGACGCAGAAG
TGTACCCAGAGCATTCATTTCAGGTGGACTCACCTGCG

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

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               2-217, gnl|bosTau2|chr9 (33164033-33164254)
               

               
               2-217, gnl|canFam2|chr12 (52104987-52105276)
               

               
               2-217, gnl|dasNov1|scaffold_101494 (3882-4181)
               

               
               2-217, gnl|echTel1|scaffold_285257 (7705-8002)
               

               
               2-217, gnl|galGal2|chr3 (73750258-73749898)
               

               
               2-217, gnl|hg17|chr6 (90693772-90694081)
               

               
               2-217, gnl|Hg17|chr6 (90694127-90693903)
               

               
               2-217, gnl|mm7|chr4 (32863744-32863432)
               

               
               2-217, gnl|Mm7|chr4 (32863382-32863599)
               

               
               2-217, gnl|monDom2|scaffold_0 (138288218-138287858)
               

               
               2-217, gnl|oryCun1|scaffold_213159 (114169-113862)
               

               
               2-217, gnl|panTro1|chr5 (92415641-92415950)
               

               
               2-217, gnl|rheMac2|chr4 (85811954-85812259)
               

               
               2-217, gnl|rn3|chr5 (48886118-48885812)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-217, gnl|bosTau2|chr9 (33164033-33164254)
               

               
               2-217, gnl|canFam2|chr12 (52104987-52105276)
               

               
               2-217, gnl|dasNov1|scaffold_101494 (3882-4181)
               

               
               2-217, gnl|echTel1|scaffold_285257 (7705-8002)
               

               
               2-217, gnl|galGal2|chr3 (73750258-73749898)
               

               
               2-217, gnl|hg17|chr6 (90693772-90694081)
               

               
               2-217, gnl|Hg17|chr6 (90694127-90693903)
               

               
               2-217, gnl|mm7|chr4 (32863744-32863432)
               

               
               2-217, gnl|Mm7|chr4 (32863382-32863599)
               

               
               2-217, gnl|monDom2|scaffold_0 (138288218-138287858)
               

               
               2-217, gnl|oryCun1|scaffold_213159 (114169-113862)
               

               
               2-217, gnl|panTro1|chr5 (92415641-92415950)
               

               
               2-217, gnl|rheMac2|chr4 (85811954-85812259)
               

               
               2-217, gnl|rn3|chr5 (48886118-48885812)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cbl (0.114797)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.114797)

	2-217, gnl\|bosTau2\|chr9 (33164033-33164254)
	2-217, gnl\|canFam2\|chr12 (52104987-52105276)
	2-217, gnl\|dasNov1\|scaffold_101494 (3882-4181)
	2-217, gnl\|echTel1\|scaffold_285257 (7705-8002)
	2-217, gnl\|galGal2\|chr3 (73750258-73749898)
	2-217, gnl\|hg17\|chr6 (90693772-90694081)
	2-217, gnl\|Hg17\|chr6 (90694127-90693903)
	2-217, gnl\|mm7\|chr4 (32863744-32863432)
	2-217, gnl\|Mm7\|chr4 (32863382-32863599)
	2-217, gnl\|monDom2\|scaffold_0 (138288218-138287858)
	2-217, gnl\|oryCun1\|scaffold_213159 (114169-113862)
	2-217, gnl\|panTro1\|chr5 (92415641-92415950)
	2-217, gnl\|rheMac2\|chr4 (85811954-85812259)
	2-217, gnl\|rn3\|chr5 (48886118-48885812)