Non-Coding RNA Search

rcbl0_014088.y1

Sequence:


               
               CTTACAGTACTGCCTAGTGCTTCTAGTCTAGACTATCTGACCCACTTGAAGCTTGCAGGA
CCCTTCGCCTGAACATGGGTCACTTCGCTTCTTCTGTACTTGCTGCTCTTCATACAGGCA
CGCTTGGAGCCCGCATATTCCGCACGCATGTCGACCTTCCACCTTCACGCAACCTGGTGC
CTTAACCTCATGAGTACAAGGATGCCTGCTGGAAACACGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTACAGTACTGCCTAGTGCTTCTAGTCTAGACTATCTGACCCACTTGAAGCTTGCAGGA
CCCTTCGCCTGAACATGGGTCACTTCGCTTCTTCTGTACTTGCTGCTCTTCATACAGGCA
CGCTTGGAGCCCGCATATTCCGCACGCATGTCGACCTTCCACCTTCACGCAACCTGGTGC
CTTAACCTCATGAGTACAAGGATGCCTGCTGGAAACACGTG

Aligned organism(s): 14 entry(ies)

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Aligned organism(s): 14 entry(ies)

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               1-218, gnl|bosTau2|chr2 (62090320-62090538)
               

               
               1-218, gnl|canFam2|chr37 (19177798-19178114)
               

               
               1-218, gnl|dasNov1|scaffold_1916 (66523-66895)
               

               
               1-218, gnl|echTel1|scaffold_301672 (89440-89803)
               

               
               1-218, gnl|galGal2|chr7 (13006758-13006330)
               

               
               1-218, gnl|hg17|chr2 (208512810-208513181)
               

               
               1-218, gnl|Hg17|chr2 (208513062-208512846)
               

               
               1-218, gnl|loxAfr1|scaffold_129590 (1383-1018)
               

               
               1-218, gnl|mm7|chr1 (65031736-65032062)
               

               
               1-218, gnl|Mm7|chr1 (65031959-65031763)
               

               
               1-218, gnl|monDom2|scaffold_39 (15087806-15087390)
               

               
               1-218, gnl|oryCun1|scaffold_210726 (95331-95689)
               

               
               1-218, gnl|panTro1|chr13 (98573400-98573771)
               

               
               1-218, gnl|rn3|chr9 (63584094-63584428)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-218, gnl|bosTau2|chr2 (62090320-62090538)
               

               
               1-218, gnl|canFam2|chr37 (19177798-19178114)
               

               
               1-218, gnl|dasNov1|scaffold_1916 (66523-66895)
               

               
               1-218, gnl|echTel1|scaffold_301672 (89440-89803)
               

               
               1-218, gnl|galGal2|chr7 (13006758-13006330)
               

               
               1-218, gnl|hg17|chr2 (208512810-208513181)
               

               
               1-218, gnl|Hg17|chr2 (208513062-208512846)
               

               
               1-218, gnl|loxAfr1|scaffold_129590 (1383-1018)
               

               
               1-218, gnl|mm7|chr1 (65031736-65032062)
               

               
               1-218, gnl|Mm7|chr1 (65031959-65031763)
               

               
               1-218, gnl|monDom2|scaffold_39 (15087806-15087390)
               

               
               1-218, gnl|oryCun1|scaffold_210726 (95331-95689)
               

               
               1-218, gnl|panTro1|chr13 (98573400-98573771)
               

               
               1-218, gnl|rn3|chr9 (63584094-63584428)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbl (0.114797)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.114797)

	1-218, gnl\|bosTau2\|chr2 (62090320-62090538)
	1-218, gnl\|canFam2\|chr37 (19177798-19178114)
	1-218, gnl\|dasNov1\|scaffold_1916 (66523-66895)
	1-218, gnl\|echTel1\|scaffold_301672 (89440-89803)
	1-218, gnl\|galGal2\|chr7 (13006758-13006330)
	1-218, gnl\|hg17\|chr2 (208512810-208513181)
	1-218, gnl\|Hg17\|chr2 (208513062-208512846)
	1-218, gnl\|loxAfr1\|scaffold_129590 (1383-1018)
	1-218, gnl\|mm7\|chr1 (65031736-65032062)
	1-218, gnl\|Mm7\|chr1 (65031959-65031763)
	1-218, gnl\|monDom2\|scaffold_39 (15087806-15087390)
	1-218, gnl\|oryCun1\|scaffold_210726 (95331-95689)
	1-218, gnl\|panTro1\|chr13 (98573400-98573771)
	1-218, gnl\|rn3\|chr9 (63584094-63584428)