Non-Coding RNA Search

rcbl0_019920.y1

Sequence:


               
               GTTTGAAATAGCATTTGTTTCTTAGGCTGTGCTTAAATTCTTTTTTCAGAAAGGCAAACT
GTTTCTCAAAAAGGATTCATATGAAATTTGGAGAGGGAACGTGATGAGGTCGATTTCTAT
TAAGCAGTGGTGACACATGACAGAAAATATCAGACTTGACTAGCCTTCCTATTAATTTAG
TTTAAATGTCATGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTGAAATAGCATTTGTTTCTTAGGCTGTGCTTAAATTCTTTTTTCAGAAAGGCAAACT
GTTTCTCAAAAAGGATTCATATGAAATTTGGAGAGGGAACGTGATGAGGTCGATTTCTAT
TAAGCAGTGGTGACACATGACAGAAAATATCAGACTTGACTAGCCTTCCTATTAATTTAG
TTTAAATGTCATGTG

Aligned organism(s): 13 entry(ies)

More info

Aligned organism(s): 13 entry(ies)

Help | Less info


               
               1-193, gnl|bosTau2|chr10 (29234612-29234417)
               

               
               1-193, gnl|canFam2|chr8 (30188283-30189210)
               

               
               1-193, gnl|dasNov1|scaffold_78640 (5812-4828)
               

               
               1-193, gnl|echTel1|scaffold_110495 (164-1131)
               

               
               1-193, gnl|hg17|chr14 (50349606-50350507)
               

               
               1-193, gnl|Hg17|chr14 (50350091-50349902)
               

               
               1-193, gnl|loxAfr1|scaffold_5686 (61785-62762)
               

               
               1-193, gnl|mm7|chr12 (68036981-68037849)
               

               
               1-193, gnl|Mm7|chr12 (68037520-68037275)
               

               
               1-193, gnl|oryCun1|scaffold_113744 (4391-3587)
               

               
               1-193, gnl|panTro1|chr15 (49768403-49769302)
               

               
               1-193, gnl|rheMac2|chr7 (113865677-113866580)
               

               
               1-193, gnl|rn3|chr6 (92216732-92217756)

Aligned organism(s): 13 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-193, gnl|bosTau2|chr10 (29234612-29234417)
               

               
               1-193, gnl|canFam2|chr8 (30188283-30189210)
               

               
               1-193, gnl|dasNov1|scaffold_78640 (5812-4828)
               

               
               1-193, gnl|echTel1|scaffold_110495 (164-1131)
               

               
               1-193, gnl|hg17|chr14 (50349606-50350507)
               

               
               1-193, gnl|Hg17|chr14 (50350091-50349902)
               

               
               1-193, gnl|loxAfr1|scaffold_5686 (61785-62762)
               

               
               1-193, gnl|mm7|chr12 (68036981-68037849)
               

               
               1-193, gnl|Mm7|chr12 (68037520-68037275)
               

               
               1-193, gnl|oryCun1|scaffold_113744 (4391-3587)
               

               
               1-193, gnl|panTro1|chr15 (49768403-49769302)
               

               
               1-193, gnl|rheMac2|chr7 (113865677-113866580)
               

               
               1-193, gnl|rn3|chr6 (92216732-92217756)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cbl (0.114797)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.114797)

	1-193, gnl\|bosTau2\|chr10 (29234612-29234417)
	1-193, gnl\|canFam2\|chr8 (30188283-30189210)
	1-193, gnl\|dasNov1\|scaffold_78640 (5812-4828)
	1-193, gnl\|echTel1\|scaffold_110495 (164-1131)
	1-193, gnl\|hg17\|chr14 (50349606-50350507)
	1-193, gnl\|Hg17\|chr14 (50350091-50349902)
	1-193, gnl\|loxAfr1\|scaffold_5686 (61785-62762)
	1-193, gnl\|mm7\|chr12 (68036981-68037849)
	1-193, gnl\|Mm7\|chr12 (68037520-68037275)
	1-193, gnl\|oryCun1\|scaffold_113744 (4391-3587)
	1-193, gnl\|panTro1\|chr15 (49768403-49769302)
	1-193, gnl\|rheMac2\|chr7 (113865677-113866580)
	1-193, gnl\|rn3\|chr6 (92216732-92217756)