Non-Coding RNA Search

rcbl0_020491.y1

Sequence:


               
               GACTATGCTGAACAAATCTGAGAACTAAGCTGTTTATCCTTAGTTGGTGGCTCTATTTTA
TGTCATGAGAAGAGTGTTCCCCACCTAAGTCTCCAAGAAAAATTTTCCCTTCCTTCTCCA
GACTCACATGTAGCAAAAACTACTCTAAGTGGAACATGCTTTGTTCTTGAAAGAGCAGGA
CAAAGGTTAAACAAAAGCTGTTCTTCCTGGAAGCCCAGTAAAGGTTAGCACATAAACTTC
TAGTTCCACTCAGTTCCTTTTTAACCCCTTTCTTAACTATCTTCTTAACTTTCCACATAC
ACTTCAAAAATCAAAACAGTACTACAAAGTACTCACTGAGAATCTGACTTTTACTCCTAT
CCCATCTGCCTCCACCATCACCCCCTTCTGGTCAAAGCTAATGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACTATGCTGAACAAATCTGAGAACTAAGCTGTTTATCCTTAGTTGGTGGCTCTATTTTA
TGTCATGAGAAGAGTGTTCCCCACCTAAGTCTCCAAGAAAAATTTTCCCTTCCTTCTCCA
GACTCACATGTAGCAAAAACTACTCTAAGTGGAACATGCTTTGTTCTTGAAAGAGCAGGA
CAAAGGTTAAACAAAAGCTGTTCTTCCTGGAAGCCCAGTAAAGGTTAGCACATAAACTTC
TAGTTCCACTCAGTTCCTTTTTAACCCCTTTCTTAACTATCTTCTTAACTTTCCACATAC
ACTTCAAAAATCAAAACAGTACTACAAAGTACTCACTGAGAATCTGACTTTTACTCCTAT
CCCATCTGCCTCCACCATCACCCCCTTCTGGTCAAAGCTAATGT

Aligned organism(s): 10 entry(ies)

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Aligned organism(s): 10 entry(ies)

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               1-400, gnl|bosTau2|chr2 (31405442-31405051)
               

               
               1-400, gnl|canFam2|chr19 (53100903-53101398)
               

               
               1-400, gnl|hg17|chr2 (148874721-148875215)
               

               
               1-400, gnl|Hg17|chr2 (148874886-148875281)
               

               
               1-400, gnl|loxAfr1|scaffold_1330 (15279-14810)
               

               
               1-400, gnl|mm7|chr2 (49151573-49152022)
               

               
               1-400, gnl|oryCun1|scaffold_157155 (2427-1972)
               

               
               1-400, gnl|panTro1|chr13_random (14291484-14291978)
               

               
               1-400, gnl|rheMac2|chr12 (11842448-11842943)
               

               
               1-400, gnl|rn3|chr3 (30010630-30011097)

Aligned organism(s): 10 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-400, gnl|bosTau2|chr2 (31405442-31405051)
               

               
               1-400, gnl|canFam2|chr19 (53100903-53101398)
               

               
               1-400, gnl|hg17|chr2 (148874721-148875215)
               

               
               1-400, gnl|Hg17|chr2 (148874886-148875281)
               

               
               1-400, gnl|loxAfr1|scaffold_1330 (15279-14810)
               

               
               1-400, gnl|mm7|chr2 (49151573-49152022)
               

               
               1-400, gnl|oryCun1|scaffold_157155 (2427-1972)
               

               
               1-400, gnl|panTro1|chr13_random (14291484-14291978)
               

               
               1-400, gnl|rheMac2|chr12 (11842448-11842943)
               

               
               1-400, gnl|rn3|chr3 (30010630-30011097)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               cbl (0.114797)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.114797)

	1-400, gnl\|bosTau2\|chr2 (31405442-31405051)
	1-400, gnl\|canFam2\|chr19 (53100903-53101398)
	1-400, gnl\|hg17\|chr2 (148874721-148875215)
	1-400, gnl\|Hg17\|chr2 (148874886-148875281)
	1-400, gnl\|loxAfr1\|scaffold_1330 (15279-14810)
	1-400, gnl\|mm7\|chr2 (49151573-49152022)
	1-400, gnl\|oryCun1\|scaffold_157155 (2427-1972)
	1-400, gnl\|panTro1\|chr13_random (14291484-14291978)
	1-400, gnl\|rheMac2\|chr12 (11842448-11842943)
	1-400, gnl\|rn3\|chr3 (30010630-30011097)