Non-Coding RNA Search

rcbl0_021796.y1

Sequence:


               
               GGATTTTTCCTTATATTACAGAATTAGGGGCTTTTTCTTCCTATATGCTGCCTTTGAAGA
GAAATTACAGCGTTACTCTCCATTGAACAGGCTGTTGTGAGTTTGGTAGATATAATTACT
CTATCCTATTTTTGTAACTTAAGAAAACCTAACTATCAATTTGCTGGCCCATGAAAGAAC
AAGATATGCTGTACTTGTTAATGTTAGTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGATTTTTCCTTATATTACAGAATTAGGGGCTTTTTCTTCCTATATGCTGCCTTTGAAGA
GAAATTACAGCGTTACTCTCCATTGAACAGGCTGTTGTGAGTTTGGTAGATATAATTACT
CTATCCTATTTTTGTAACTTAAGAAAACCTAACTATCAATTTGCTGGCCCATGAAAGAAC
AAGATATGCTGTACTTGTTAATGTTAGTTTT

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

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               4-211, gnl|bosTau2|chr20 (12773147-12772933)
               

               
               4-211, gnl|canFam2|chr2 (46787184-46788464)
               

               
               4-211, gnl|dasNov1|scaffold_6634 (45892-44675)
               

               
               4-211, gnl|echTel1|scaffold_72670 (11290-10076)
               

               
               4-211, gnl|hg17|chr5 (56149955-56151158)
               

               
               4-211, gnl|Hg17|chr5 (56150208-56150415)
               

               
               4-211, gnl|loxAfr1|scaffold_41114 (862-2151)
               

               
               4-211, gnl|mm7|chr13 (108963028-108961754)
               

               
               4-211, gnl|Mm7|chr13 (108962683-108962470)
               

               
               4-211, gnl|monDom2|scaffold_27 (19577770-19579076)
               

               
               4-211, gnl|oryCun1|scaffold_215234 (46353-45097)
               

               
               4-211, gnl|panTro1|chr4 (60020529-60019329)
               

               
               4-211, gnl|rheMac2|chr6 (54480678-54481901)
               

               
               4-211, gnl|rn3|chr2 (43049090-43047823)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-211, gnl|bosTau2|chr20 (12773147-12772933)
               

               
               4-211, gnl|canFam2|chr2 (46787184-46788464)
               

               
               4-211, gnl|dasNov1|scaffold_6634 (45892-44675)
               

               
               4-211, gnl|echTel1|scaffold_72670 (11290-10076)
               

               
               4-211, gnl|hg17|chr5 (56149955-56151158)
               

               
               4-211, gnl|Hg17|chr5 (56150208-56150415)
               

               
               4-211, gnl|loxAfr1|scaffold_41114 (862-2151)
               

               
               4-211, gnl|mm7|chr13 (108963028-108961754)
               

               
               4-211, gnl|Mm7|chr13 (108962683-108962470)
               

               
               4-211, gnl|monDom2|scaffold_27 (19577770-19579076)
               

               
               4-211, gnl|oryCun1|scaffold_215234 (46353-45097)
               

               
               4-211, gnl|panTro1|chr4 (60020529-60019329)
               

               
               4-211, gnl|rheMac2|chr6 (54480678-54481901)
               

               
               4-211, gnl|rn3|chr2 (43049090-43047823)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cbl (0.114797)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.114797)

	4-211, gnl\|bosTau2\|chr20 (12773147-12772933)
	4-211, gnl\|canFam2\|chr2 (46787184-46788464)
	4-211, gnl\|dasNov1\|scaffold_6634 (45892-44675)
	4-211, gnl\|echTel1\|scaffold_72670 (11290-10076)
	4-211, gnl\|hg17\|chr5 (56149955-56151158)
	4-211, gnl\|Hg17\|chr5 (56150208-56150415)
	4-211, gnl\|loxAfr1\|scaffold_41114 (862-2151)
	4-211, gnl\|mm7\|chr13 (108963028-108961754)
	4-211, gnl\|Mm7\|chr13 (108962683-108962470)
	4-211, gnl\|monDom2\|scaffold_27 (19577770-19579076)
	4-211, gnl\|oryCun1\|scaffold_215234 (46353-45097)
	4-211, gnl\|panTro1\|chr4 (60020529-60019329)
	4-211, gnl\|rheMac2\|chr6 (54480678-54481901)
	4-211, gnl\|rn3\|chr2 (43049090-43047823)