Non-Coding RNA Search

rcbl0_023991.y1

Sequence:


               
               AAAAAAAGTTTAGAAAATATTCTTAAAGTAAATTTTTATAGTGTTAATTTTGTAATAATT
TATGTTTTACTATATTACAGAGCTAACTGACCAGAATAGTTTCAGAAACAATATGAAACT
TAGGAAAGTTGAAGCAATGTTTATATTTTTAAAATGTTCTTTGAATTATGTTTTTATTGT
ACATTTCTTCAGACTGAAAAGTATGTACATATCTTTGTTATTTTTGCACAATTTTCGTCT
TGTTCGGTTTTAGAAGTCTTTTTTTTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAAAAGTTTAGAAAATATTCTTAAAGTAAATTTTTATAGTGTTAATTTTGTAATAATT
TATGTTTTACTATATTACAGAGCTAACTGACCAGAATAGTTTCAGAAACAATATGAAACT
TAGGAAAGTTGAAGCAATGTTTATATTTTTAAAATGTTCTTTGAATTATGTTTTTATTGT
ACATTTCTTCAGACTGAAAAGTATGTACATATCTTTGTTATTTTTGCACAATTTTCGTCT
TGTTCGGTTTTAGAAGTCTTTTTTTTTA

Aligned organism(s): 16 entry(ies)

More info

Aligned organism(s): 16 entry(ies)

Help | Less info


               
               2-267, gnl|bosTau2|chr4 (22663521-22663786)
               

               
               2-267, gnl|canFam2|chr18 (17808683-17808449)
               

               
               2-267, gnl|dasNov1|scaffold_92525 (38711-38483)
               

               
               2-267, gnl|echTel1|scaffold_321703 (38885-39106)
               

               
               2-267, gnl|galGal2|chr1 (9671141-9670900)
               

               
               2-267, gnl|hg17|chr7 (104840099-104840324)
               

               
               2-267, gnl|Hg17|chr7 (104840386-104840121)
               

               
               2-267, gnl|loxAfr1|scaffold_6909 (7222-7448)
               

               
               2-267, gnl|mm7|chr12 (31219195-31218951)
               

               
               2-267, gnl|Mm7|chr12 (31218888-31219149)
               

               
               2-267, gnl|monDom2|scaffold_30 (31836493-31836722)
               

               
               2-267, gnl|oryCun1|scaffold_186314 (56468-56242)
               

               
               2-267, gnl|panTro1|chr6 (106740774-106740999)
               

               
               2-267, gnl|rheMac2|chr3 (143024348-143024573)
               

               
               2-267, gnl|rn3|chr6 (51719177-51718935)
               

               
               2-267, gnl|xenTro1|scaffold_61 (2663705-2663907)

Aligned organism(s): 16 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-267, gnl|bosTau2|chr4 (22663521-22663786)
               

               
               2-267, gnl|canFam2|chr18 (17808683-17808449)
               

               
               2-267, gnl|dasNov1|scaffold_92525 (38711-38483)
               

               
               2-267, gnl|echTel1|scaffold_321703 (38885-39106)
               

               
               2-267, gnl|galGal2|chr1 (9671141-9670900)
               

               
               2-267, gnl|hg17|chr7 (104840099-104840324)
               

               
               2-267, gnl|Hg17|chr7 (104840386-104840121)
               

               
               2-267, gnl|loxAfr1|scaffold_6909 (7222-7448)
               

               
               2-267, gnl|mm7|chr12 (31219195-31218951)
               

               
               2-267, gnl|Mm7|chr12 (31218888-31219149)
               

               
               2-267, gnl|monDom2|scaffold_30 (31836493-31836722)
               

               
               2-267, gnl|oryCun1|scaffold_186314 (56468-56242)
               

               
               2-267, gnl|panTro1|chr6 (106740774-106740999)
               

               
               2-267, gnl|rheMac2|chr3 (143024348-143024573)
               

               
               2-267, gnl|rn3|chr6 (51719177-51718935)
               

               
               2-267, gnl|xenTro1|scaffold_61 (2663705-2663907)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cbl (0.114797)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.114797)

	2-267, gnl\|bosTau2\|chr4 (22663521-22663786)
	2-267, gnl\|canFam2\|chr18 (17808683-17808449)
	2-267, gnl\|dasNov1\|scaffold_92525 (38711-38483)
	2-267, gnl\|echTel1\|scaffold_321703 (38885-39106)
	2-267, gnl\|galGal2\|chr1 (9671141-9670900)
	2-267, gnl\|hg17\|chr7 (104840099-104840324)
	2-267, gnl\|Hg17\|chr7 (104840386-104840121)
	2-267, gnl\|loxAfr1\|scaffold_6909 (7222-7448)
	2-267, gnl\|mm7\|chr12 (31219195-31218951)
	2-267, gnl\|Mm7\|chr12 (31218888-31219149)
	2-267, gnl\|monDom2\|scaffold_30 (31836493-31836722)
	2-267, gnl\|oryCun1\|scaffold_186314 (56468-56242)
	2-267, gnl\|panTro1\|chr6 (106740774-106740999)
	2-267, gnl\|rheMac2\|chr3 (143024348-143024573)
	2-267, gnl\|rn3\|chr6 (51719177-51718935)
	2-267, gnl\|xenTro1\|scaffold_61 (2663705-2663907)