rcbr0_001411.y1
|
ATTCCATTGCCAAACTGCCTCTGCACACCCTGCGCTCGCGCCTCTCCATCATCCTGCAGG
ACCCCGTCCTCTTCAGCGGCACCATCCGATTTAACCTGGACCCAGAGAAGAAGTGCTCTG
ACAGCACGCTGTGGGAGGCCCTGGAGATAGCCCAGCTGAAGCTGGTGGTGAAGGCGCTGC
CGGGGGGCCTTGATGCCATCATCACGGAAGGTGGGGAGAACTTCAGCCAGGGCCAGAGGC
AGCTGTTCTGCCTGGCCCGGGCCTTCGTGAGGAAAACCAGCATCTTCATCATGGATGAAG
CCACGGCTTCCATTGACATGGCCACGGAAAACATCCTCCAGAAGGTGGTGATGACGGCCT
TTGCAGACCGCACTGTGGTCACCATCGCGCACCGCGTGCACACCATCCTGAGTGCTGACC
TGGTGATTGTCCTGAAGCGTGGCGCCATCCTCGAGGGGGGGCCCG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ATTCCATTGCCAAACTGCCTCTGCACACCCTGCGCTCGCGCCTCTCCATCATCCTGCAGG
ACCCCGTCCTCTTCAGCGGCACCATCCGATTTAACCTGGACCCAGAGAAGAAGTGCTCTG
ACAGCACGCTGTGGGAGGCCCTGGAGATAGCCCAGCTGAAGCTGGTGGTGAAGGCGCTGC
CGGGGGGCCTTGATGCCATCATCACGGAAGGTGGGGAGAACTTCAGCCAGGGCCAGAGGC
AGCTGTTCTGCCTGGCCCGGGCCTTCGTGAGGAAAACCAGCATCTTCATCATGGATGAAG
CCACGGCTTCCATTGACATGGCCACGGAAAACATCCTCCAGAAGGTGGTGATGACGGCCT
TTGCAGACCGCACTGTGGTCACCATCGCGCACCGCGTGCACACCATCCTGAGTGCTGACC
TGGTGATTGTCCTGAAGCGTGGCGCCATCCTCGAGGGGGGGCCCG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
192-327, gnl|bosTau2|chr15 (24371998-24372133) |
|
192-327, gnl|canFam2|chr27 (28363035-28362887) |
|
192-327, gnl|danRer3|chr4 (17416022-17416160) |
|
192-327, gnl|dasNov1|scaffold_33452 (1465-1314) |
|
192-327, gnl|echTel1|scaffold_159066 (6127-6277) |
|
192-327, gnl|fr1|chrUn (6789260-6789407) |
|
192-327, gnl|galGal2|chr5 (9439139-9439285) |
|
192-327, gnl|hg17|chr11 (17372384-17372535) |
|
192-327, gnl|Hg17|chr11 (17372523-17372388) |
|
192-327, gnl|loxAfr1|scaffold_39390 (3636-3484) |
|
192-327, gnl|mm7|chr7 (42282038-42282189) |
|
192-327, gnl|Mm7|chr7 (42282177-42282042) |
|
192-327, gnl|monDom2|scaffold_10 (54585998-54585852) |
|
192-327, gnl|oryCun1|scaffold_209349 (88379-88235) |
|
192-327, gnl|panTro1|chr9 (17554762-17554913) |
|
192-327, gnl|rheMac2|chr14 (54544286-54544135) |
|
192-327, gnl|rn3|chr1 (96701864-96702015) |
|
192-327, gnl|tetNig1|chr13 (6290993-6291131) |
|
192-327, gnl|xenTro1|scaffold_2108 (50218-50067) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
192-327, gnl|bosTau2|chr15 (24371998-24372133) |
|
192-327, gnl|canFam2|chr27 (28363035-28362887) |
|
192-327, gnl|danRer3|chr4 (17416022-17416160) |
|
192-327, gnl|dasNov1|scaffold_33452 (1465-1314) |
|
192-327, gnl|echTel1|scaffold_159066 (6127-6277) |
|
192-327, gnl|fr1|chrUn (6789260-6789407) |
|
192-327, gnl|galGal2|chr5 (9439139-9439285) |
|
192-327, gnl|hg17|chr11 (17372384-17372535) |
|
192-327, gnl|Hg17|chr11 (17372523-17372388) |
|
192-327, gnl|loxAfr1|scaffold_39390 (3636-3484) |
|
192-327, gnl|mm7|chr7 (42282038-42282189) |
|
192-327, gnl|Mm7|chr7 (42282177-42282042) |
|
192-327, gnl|monDom2|scaffold_10 (54585998-54585852) |
|
192-327, gnl|oryCun1|scaffold_209349 (88379-88235) |
|
192-327, gnl|panTro1|chr9 (17554762-17554913) |
|
192-327, gnl|rheMac2|chr14 (54544286-54544135) |
|
192-327, gnl|rn3|chr1 (96701864-96702015) |
|
192-327, gnl|tetNig1|chr13 (6290993-6291131) |
|
192-327, gnl|xenTro1|scaffold_2108 (50218-50067) |
