Non-Coding RNA Search

rcbr0_009113.y1

Sequence:


               
               ACAGAGGACGGCAAGGACCGATCGCCAGTAGCCTCCCGGCGGGACCTAGGGTTCCGCGCC
CCCCGCGCAGCGCCCCCCGCCGGAGCCGCGCCGGGCAAGCCGGCTAGGGAGCTGGGCTGA
TTGGCGGCCGCCGGCGGCCGGGGGAGGGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACAGAGGACGGCAAGGACCGATCGCCAGTAGCCTCCCGGCGGGACCTAGGGTTCCGCGCC
CCCCGCGCAGCGCCCCCCGCCGGAGCCGCGCCGGGCAAGCCGGCTAGGGAGCTGGGCTGA
TTGGCGGCCGCCGGCGGCCGGGGGAGGGGG

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

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               5-150, gnl|bosTau2|chr18 (54320608-54320752)
               

               
               5-150, gnl|dasNov1|scaffold_2098 (80622-80242)
               

               
               5-150, gnl|echTel1|scaffold_210094 (9140-9537)
               

               
               5-150, gnl|hg17|chr19 (34708797-34709172)
               

               
               5-150, gnl|Hg17|chr19 (34709069-34709209)
               

               
               5-150, gnl|mm7|chr7 (37172290-37172674)
               

               
               5-150, gnl|Mm7|chr7 (37172576-37172711)
               

               
               5-150, gnl|monDom2|scaffold_35 (8277996-8277431)
               

               
               5-150, gnl|panTro1|chr20_random (12949225-12948850)
               

               
               5-150, gnl|rn3|chr1 (92516693-92517077)
               

               
               5-150, gnl|xenTro1|scaffold_11595 (6390-6001)

Aligned organism(s): 11 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-150, gnl|bosTau2|chr18 (54320608-54320752)
               

               
               5-150, gnl|dasNov1|scaffold_2098 (80622-80242)
               

               
               5-150, gnl|echTel1|scaffold_210094 (9140-9537)
               

               
               5-150, gnl|hg17|chr19 (34708797-34709172)
               

               
               5-150, gnl|Hg17|chr19 (34709069-34709209)
               

               
               5-150, gnl|mm7|chr7 (37172290-37172674)
               

               
               5-150, gnl|Mm7|chr7 (37172576-37172711)
               

               
               5-150, gnl|monDom2|scaffold_35 (8277996-8277431)
               

               
               5-150, gnl|panTro1|chr20_random (12949225-12948850)
               

               
               5-150, gnl|rn3|chr1 (92516693-92517077)
               

               
               5-150, gnl|xenTro1|scaffold_11595 (6390-6001)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cbr (0.127975)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbr (0.127975)

	5-150, gnl\|bosTau2\|chr18 (54320608-54320752)
	5-150, gnl\|dasNov1\|scaffold_2098 (80622-80242)
	5-150, gnl\|echTel1\|scaffold_210094 (9140-9537)
	5-150, gnl\|hg17\|chr19 (34708797-34709172)
	5-150, gnl\|Hg17\|chr19 (34709069-34709209)
	5-150, gnl\|mm7\|chr7 (37172290-37172674)
	5-150, gnl\|Mm7\|chr7 (37172576-37172711)
	5-150, gnl\|monDom2\|scaffold_35 (8277996-8277431)
	5-150, gnl\|panTro1\|chr20_random (12949225-12948850)
	5-150, gnl\|rn3\|chr1 (92516693-92517077)
	5-150, gnl\|xenTro1\|scaffold_11595 (6390-6001)