rche12_a3.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCAACGGCCACCCGCGGGACCTGCGCTGCTTCCGGAAGGTGTCCTGCTACATCATGCAGG ACGACATGCTGCTGCCGCACCTGACTGTGCAGGAAGCCATGATGGTGAGCAGCCCGGGGC CGCCCGCCCCGCTCCTCCCGCTAGACGGGGCGGCTCCAGCGCGGGCTCTGCCAGGCGGCC CGCAGGTGGAAGCACCCCTCCCTTGCACCTGCTTCACCAGGTGTGCTGTTCAGATAGATT CCCCACCCCCATCCCAAGATCCTGGGTTCGTAGACCCCAGATGGCACATGGAGATCAAGT TTCTGAGAAGGTTATTGACCAGGCTGCTGGCGGTGACCCTTCTGGGGTGACCGCGGTCCT ACCCCCACGGGCCAAGGGTCTTTCCTTCCCATCAGGGTTCTGTAGCTTTGGGCCCAAGTT CCAGGCCATCTGGGGCCTGGGTTAGGGCCCCGGGGGTCTTGATCCCTCACTTGCCTGCCT GCCAGGTGGGGGTGAAACCAGCATTTGTTGCACACCCACGGGGTCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCAACGGCCACCCGCGGGACCTGCGCTGCTTCCGGAAGGTGTCCTGCTACATCATGCAGG ACGACATGCTGCTGCCGCACCTGACTGTGCAGGAAGCCATGATGGTGAGCAGCCCGGGGC CGCCCGCCCCGCTCCTCCCGCTAGACGGGGCGGCTCCAGCGCGGGCTCTGCCAGGCGGCC CGCAGGTGGAAGCACCCCTCCCTTGCACCTGCTTCACCAGGTGTGCTGTTCAGATAGATT CCCCACCCCCATCCCAAGATCCTGGGTTCGTAGACCCCAGATGGCACATGGAGATCAAGT TTCTGAGAAGGTTATTGACCAGGCTGCTGGCGGTGACCCTTCTGGGGTGACCGCGGTCCT ACCCCCACGGGCCAAGGGTCTTTCCTTCCCATCAGGGTTCTGTAGCTTTGGGCCCAAGTT CCAGGCCATCTGGGGCCTGGGTTAGGGCCCCGGGGGTCTTGATCCCTCACTTGCCTGCCT GCCAGGTGGGGGTGAAACCAGCATTTGTTGCACACCCACGGGGTCAG |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 301-525, + strand, RNAz p=0.998256 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 301-525, + strand, RNAz p=0.998256 |
| Aligned organism(s): 5 entry(ies) | More info |
| Aligned organism(s): 5 entry(ies) | Help | Less info |
| 1-136, gnl|bosTau2|chr1 (92721259-92721394) | |
| 1-136, gnl|Hg17|chr21 (42566511-42566619) | |
| 1-136, gnl|Mm7|chr17 (29289815-29289924) | |
| 270-525, gnl|bosTau2|chr1 (92721856-92722112) | |
| 270-525, gnl|Hg17|chr21 (42566826-42567111) |
| Aligned organism(s): 5 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-136, gnl|bosTau2|chr1 (92721259-92721394) | |
| 1-136, gnl|Hg17|chr21 (42566511-42566619) | |
| 1-136, gnl|Mm7|chr17 (29289815-29289924) | |
| 270-525, gnl|bosTau2|chr1 (92721856-92722112) | |
| 270-525, gnl|Hg17|chr21 (42566826-42567111) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| che (0.136314) |