rche12_i10.y1
|
TGTGCGCGGGCGTGTGTGTGTTTGCAATAGGTAGATAGGTTGATAGATTTAATACAAAGA
AAACCAAATGAATCCCATTTGGGGACAGTTTGGGGAGAAAAATGAAATCCCTCTGCTCAA
AAAAGGGCGTCTCCTATTTTCTGACTGGTGAGCCATGCAGTTTTAATTTCCTCTCTTTCT
CTCTCTCTCTCTTTTATTTTTTTAAATTTCATGAACCTACTTAAGGCCACAAAGACTCTC
CTGAATCCCTCAGCTGTCCGGCAGATGCACTGCTGCCAACTTTGCTCGGGTTACGAATGG
TCTGTGCCAGGCTGACGTTCCCCAGCCCTGCCTGAATGCACCTTATGATCTGTTTGCTGG
ACGATGTGGAGGTGCTGGGTGATGGGGAGGGCGGCTGGAGGGGAGGGTTGCCCAAGAGGG
GCGGCTCTTGAGGAGTGAGCCTGGTGCCACCGGCCCTGGCTTGTGTGAGA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGTGCGCGGGCGTGTGTGTGTTTGCAATAGGTAGATAGGTTGATAGATTTAATACAAAGA
AAACCAAATGAATCCCATTTGGGGACAGTTTGGGGAGAAAAATGAAATCCCTCTGCTCAA
AAAAGGGCGTCTCCTATTTTCTGACTGGTGAGCCATGCAGTTTTAATTTCCTCTCTTTCT
CTCTCTCTCTCTTTTATTTTTTTAAATTTCATGAACCTACTTAAGGCCACAAAGACTCTC
CTGAATCCCTCAGCTGTCCGGCAGATGCACTGCTGCCAACTTTGCTCGGGTTACGAATGG
TCTGTGCCAGGCTGACGTTCCCCAGCCCTGCCTGAATGCACCTTATGATCTGTTTGCTGG
ACGATGTGGAGGTGCTGGGTGATGGGGAGGGCGGCTGGAGGGGAGGGTTGCCCAAGAGGG
GCGGCTCTTGAGGAGTGAGCCTGGTGCCACCGGCCCTGGCTTGTGTGAGA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
225-372, - strand, RNAmicro p=0.997916 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
225-372, - strand, RNAmicro p=0.997916 |
|
55-418, gnl|bosTau2|chr19 (6269313-6269664) |
|
55-418, gnl|canFam2|chr9 (38596769-38596380) |
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55-418, gnl|dasNov1|scaffold_277 (201522-201898) |
|
55-418, gnl|echTel1|scaffold_314291 (119671-120037) |
|
55-418, gnl|hg17|chr17 (56802109-56802527) |
|
55-418, gnl|Hg17|chr17 (56802490-56802121) |
|
55-418, gnl|loxAfr1|scaffold_1795 (75400-75041) |
|
55-418, gnl|mm7|chr11 (85873446-85873825) |
|
55-418, gnl|Mm7|chr11 (85873790-85873457) |
|
55-418, gnl|monDom2|scaffold_56 (1522592-1522984) |
|
55-418, gnl|oryCun1|scaffold_193833 (152843-152509) |
|
55-418, gnl|panTro1|chr19 (48333931-48333513) |
|
55-418, gnl|rheMac2|chr16 (45121383-45120962) |
|
55-418, gnl|rn3|chr10 (74070268-74070641) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
55-418, gnl|bosTau2|chr19 (6269313-6269664) |
|
55-418, gnl|canFam2|chr9 (38596769-38596380) |
|
55-418, gnl|dasNov1|scaffold_277 (201522-201898) |
|
55-418, gnl|echTel1|scaffold_314291 (119671-120037) |
|
55-418, gnl|hg17|chr17 (56802109-56802527) |
|
55-418, gnl|Hg17|chr17 (56802490-56802121) |
|
55-418, gnl|loxAfr1|scaffold_1795 (75400-75041) |
|
55-418, gnl|mm7|chr11 (85873446-85873825) |
|
55-418, gnl|Mm7|chr11 (85873790-85873457) |
|
55-418, gnl|monDom2|scaffold_56 (1522592-1522984) |
|
55-418, gnl|oryCun1|scaffold_193833 (152843-152509) |
|
55-418, gnl|panTro1|chr19 (48333931-48333513) |
|
55-418, gnl|rheMac2|chr16 (45121383-45120962) |
|
55-418, gnl|rn3|chr10 (74070268-74070641) |
