Non-Coding RNA Search

rche20_g5.y1

Sequence:


               
               GAGAACAGCTGGCTGTGGAGCTCAGTAAGGCTGAGGGTGTCATTGATGGCTATGCAGATG
AAAAAACGCTTTTTGAAAGGCAAATTCAGGAAAAAACTGATATAATAGATCGTCTTGAGC
AGGAGTTGTTATGTGCAGGTAATAGATTACAAGAATTGGAAGCAGAGCAACAGCAGATCC
AAGAAGAAAGAGAATTACTGTCAAGGCAGAAGGAAGCTATGAAAGCAGAGGCAGGCCCAG
TTGAACAGCGTATGTATTTTTAGACTTAATGTGAAACATTCCTTGAAGATTCAAGGTGGC
TTTTTTTTCCTCCTCTCAGTGCCATTATTTGTGTACTTTATATAGGGATTGTAAAATTAT
AAGAAAATCTACCTTATTAGTAAATGTCTTATTAGCCAATCATGTGGAATCAGAATTTTT
TTTCTTTTTCCTTTGGCAGATTTTAACAGAAGATAATTCTTTGTTTATCCTCAAATCTCT
GCCTAAAGGGAAAATTGCATATAATGAGATAGGATAGGAGTTCCCACTGTGGCACAGTGG
GTTAAGGATTCTGCATTGCCTCATTGTGTCTCAGATTCAATCCCTGGCCTGGGAACATTC
ATAGACTGCAGGTGGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGAACAGCTGGCTGTGGAGCTCAGTAAGGCTGAGGGTGTCATTGATGGCTATGCAGATG
AAAAAACGCTTTTTGAAAGGCAAATTCAGGAAAAAACTGATATAATAGATCGTCTTGAGC
AGGAGTTGTTATGTGCAGGTAATAGATTACAAGAATTGGAAGCAGAGCAACAGCAGATCC
AAGAAGAAAGAGAATTACTGTCAAGGCAGAAGGAAGCTATGAAAGCAGAGGCAGGCCCAG
TTGAACAGCGTATGTATTTTTAGACTTAATGTGAAACATTCCTTGAAGATTCAAGGTGGC
TTTTTTTTCCTCCTCTCAGTGCCATTATTTGTGTACTTTATATAGGGATTGTAAAATTAT
AAGAAAATCTACCTTATTAGTAAATGTCTTATTAGCCAATCATGTGGAATCAGAATTTTT
TTTCTTTTTCCTTTGGCAGATTTTAACAGAAGATAATTCTTTGTTTATCCTCAAATCTCT
GCCTAAAGGGAAAATTGCATATAATGAGATAGGATAGGAGTTCCCACTGTGGCACAGTGG
GTTAAGGATTCTGCATTGCCTCATTGTGTCTCAGATTCAATCCCTGGCCTGGGAACATTC
ATAGACTGCAGGTGGGG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               36-515, gnl|bosTau2|chr4 (1556854-1556370)
               

               
               36-515, gnl|Hg17|chr7 (91336238-91336739)
               

               
               36-515, gnl|Mm7|chr5 (4035845-4036342)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               36-515, gnl|bosTau2|chr4 (1556854-1556370)
               

               
               36-515, gnl|Hg17|chr7 (91336238-91336739)
               

               
               36-515, gnl|Mm7|chr5 (4035845-4036342)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               che (0.136314)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.136314)

	36-515, gnl\|bosTau2\|chr4 (1556854-1556370)
	36-515, gnl\|Hg17\|chr7 (91336238-91336739)
	36-515, gnl\|Mm7\|chr5 (4035845-4036342)