Non-Coding RNA Search

rche23_b1.y1

Sequence:


               
               CGGGCAGCGCGGAGCCCCTTAGGAAACCCATCAAAAACCGGAGCATAAAGTTAAAGAAAG
TGAACTCCCAGGAAATACACATGCTCCCCATCAAAAAACAACGGCTCGCCACCTTTTTTC
CCAGGAAGTAAATAGTGGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGGCAGCGCGGAGCCCCTTAGGAAACCCATCAAAAACCGGAGCATAAAGTTAAAGAAAG
TGAACTCCCAGGAAATACACATGCTCCCCATCAAAAAACAACGGCTCGCCACCTTTTTTC
CCAGGAAGTAAATAGTGGCT

Aligned organism(s): 19 entry(ies)

More info

Aligned organism(s): 19 entry(ies)

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               2-140, gnl|bosTau2|chr10 (24210740-24210878)
               

               
               2-140, gnl|canFam2|chrX (13827033-13827411)
               

               
               2-140, gnl|danRer3|chrNA (242002026-242001667)
               

               
               2-140, gnl|dasNov1|scaffold_9233 (58628-58242)
               

               
               2-140, gnl|echTel1|scaffold_285872 (91072-90687)
               

               
               2-140, gnl|fr1|chrUn (106599395-106599756)
               

               
               2-140, gnl|galGal2|chr1 (114084786-114085183)
               

               
               2-140, gnl|hg17|chrX (17578174-17578559)
               

               
               2-140, gnl|Hg17|chrX (17578324-17578186)
               

               
               2-140, gnl|loxAfr1|scaffold_32651 (26172-26557)
               

               
               2-140, gnl|mm7|chrX (156553527-156553142)
               

               
               2-140, gnl|Mm7|chrX (156553375-156553513)
               

               
               2-140, gnl|monDom2|scaffold_25 (21007395-21007785)
               

               
               2-140, gnl|oryCun1|scaffold_198397 (19577-19192)
               

               
               2-140, gnl|panTro1|chrX (18172347-18172732)
               

               
               2-140, gnl|rheMac2|chrX (15521630-15522015)
               

               
               2-140, gnl|rn3|chrX (53833197-53833582)
               

               
               2-140, gnl|tetNig1|chr1_random (1426373-1426733)
               

               
               2-140, gnl|xenTro1|scaffold_56 (469655-469232)

Aligned organism(s): 19 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-140, gnl|bosTau2|chr10 (24210740-24210878)
               

               
               2-140, gnl|canFam2|chrX (13827033-13827411)
               

               
               2-140, gnl|danRer3|chrNA (242002026-242001667)
               

               
               2-140, gnl|dasNov1|scaffold_9233 (58628-58242)
               

               
               2-140, gnl|echTel1|scaffold_285872 (91072-90687)
               

               
               2-140, gnl|fr1|chrUn (106599395-106599756)
               

               
               2-140, gnl|galGal2|chr1 (114084786-114085183)
               

               
               2-140, gnl|hg17|chrX (17578174-17578559)
               

               
               2-140, gnl|Hg17|chrX (17578324-17578186)
               

               
               2-140, gnl|loxAfr1|scaffold_32651 (26172-26557)
               

               
               2-140, gnl|mm7|chrX (156553527-156553142)
               

               
               2-140, gnl|Mm7|chrX (156553375-156553513)
               

               
               2-140, gnl|monDom2|scaffold_25 (21007395-21007785)
               

               
               2-140, gnl|oryCun1|scaffold_198397 (19577-19192)
               

               
               2-140, gnl|panTro1|chrX (18172347-18172732)
               

               
               2-140, gnl|rheMac2|chrX (15521630-15522015)
               

               
               2-140, gnl|rn3|chrX (53833197-53833582)
               

               
               2-140, gnl|tetNig1|chr1_random (1426373-1426733)
               

               
               2-140, gnl|xenTro1|scaffold_56 (469655-469232)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               che (0.136314)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.136314)

	2-140, gnl\|bosTau2\|chr10 (24210740-24210878)
	2-140, gnl\|canFam2\|chrX (13827033-13827411)
	2-140, gnl\|danRer3\|chrNA (242002026-242001667)
	2-140, gnl\|dasNov1\|scaffold_9233 (58628-58242)
	2-140, gnl\|echTel1\|scaffold_285872 (91072-90687)
	2-140, gnl\|fr1\|chrUn (106599395-106599756)
	2-140, gnl\|galGal2\|chr1 (114084786-114085183)
	2-140, gnl\|hg17\|chrX (17578174-17578559)
	2-140, gnl\|Hg17\|chrX (17578324-17578186)
	2-140, gnl\|loxAfr1\|scaffold_32651 (26172-26557)
	2-140, gnl\|mm7\|chrX (156553527-156553142)
	2-140, gnl\|Mm7\|chrX (156553375-156553513)
	2-140, gnl\|monDom2\|scaffold_25 (21007395-21007785)
	2-140, gnl\|oryCun1\|scaffold_198397 (19577-19192)
	2-140, gnl\|panTro1\|chrX (18172347-18172732)
	2-140, gnl\|rheMac2\|chrX (15521630-15522015)
	2-140, gnl\|rn3\|chrX (53833197-53833582)
	2-140, gnl\|tetNig1\|chr1_random (1426373-1426733)
	2-140, gnl\|xenTro1\|scaffold_56 (469655-469232)