Non-Coding RNA Search

rche27_n8.y1

Sequence:


               
               TCCTATCTAATTTTCTTATGCTTTTATCACTTTAATATACATGTTATCTGAATAAAAGGT
TATGTTCTCTAAGCTGTGTCAATAAACACTGGTCACTGTGGTTGAATTCTCTTCATTTCT
GGCATGACACAGTACCAGAAATAGCAGGTTCATATCCTTTTAGAGGACACATGGAGCTGA
TTCAGAGGACATGGCTGTATGTTTTATAGAAAACATGTGTTCTTCCCACTAATTCCCTGT
AAATTCTTCCTGCATGTGGATCAGAGCCTAGGTCTGATTTTAGGAGGACCTGTGTGCTAC
TCCGACTATGTTCTTAAAGTATTCATTCTAATAGCAGCCCTTAAACTTAAGAAAGAAAGG
TATTGTTTTTAGATATACTGTCAGTTATTTTAAGGAAGAAGAGTTGAAACCCAACAGGAT
CAAAGTTCTGATTCTAAACACAGGTGCTTATCAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCTATCTAATTTTCTTATGCTTTTATCACTTTAATATACATGTTATCTGAATAAAAGGT
TATGTTCTCTAAGCTGTGTCAATAAACACTGGTCACTGTGGTTGAATTCTCTTCATTTCT
GGCATGACACAGTACCAGAAATAGCAGGTTCATATCCTTTTAGAGGACACATGGAGCTGA
TTCAGAGGACATGGCTGTATGTTTTATAGAAAACATGTGTTCTTCCCACTAATTCCCTGT
AAATTCTTCCTGCATGTGGATCAGAGCCTAGGTCTGATTTTAGGAGGACCTGTGTGCTAC
TCCGACTATGTTCTTAAAGTATTCATTCTAATAGCAGCCCTTAAACTTAAGAAAGAAAGG
TATTGTTTTTAGATATACTGTCAGTTATTTTAAGGAAGAAGAGTTGAAACCCAACAGGAT
CAAAGTTCTGATTCTAAACACAGGTGCTTATCAAG

Aligned organism(s): 9 entry(ies)

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Aligned organism(s): 9 entry(ies)

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               37-304, gnl|bosTau2|chr2 (5496141-5495874)
               

               
               37-304, gnl|canFam2|chr37 (3843950-3844205)
               

               
               37-304, gnl|echTel1|scaffold_313609 (37299-37541)
               

               
               37-304, gnl|hg17|chr2 (190897544-190897832)
               

               
               37-304, gnl|Hg17|chr2 (190898150-190897543)
               

               
               37-304, gnl|mm7|chr1 (53151213-53150944)
               

               
               37-304, gnl|Mm7|chr1 (53150947-53151220)
               

               
               37-304, gnl|panTro1|chr13 (80771097-80771385)
               

               
               37-304, gnl|rn3|chr9 (45569111-45569362)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               37-304, gnl|bosTau2|chr2 (5496141-5495874)
               

               
               37-304, gnl|canFam2|chr37 (3843950-3844205)
               

               
               37-304, gnl|echTel1|scaffold_313609 (37299-37541)
               

               
               37-304, gnl|hg17|chr2 (190897544-190897832)
               

               
               37-304, gnl|Hg17|chr2 (190898150-190897543)
               

               
               37-304, gnl|mm7|chr1 (53151213-53150944)
               

               
               37-304, gnl|Mm7|chr1 (53150947-53151220)
               

               
               37-304, gnl|panTro1|chr13 (80771097-80771385)
               

               
               37-304, gnl|rn3|chr9 (45569111-45569362)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               che (0.136314)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.136314)

	37-304, gnl\|bosTau2\|chr2 (5496141-5495874)
	37-304, gnl\|canFam2\|chr37 (3843950-3844205)
	37-304, gnl\|echTel1\|scaffold_313609 (37299-37541)
	37-304, gnl\|hg17\|chr2 (190897544-190897832)
	37-304, gnl\|Hg17\|chr2 (190898150-190897543)
	37-304, gnl\|mm7\|chr1 (53151213-53150944)
	37-304, gnl\|Mm7\|chr1 (53150947-53151220)
	37-304, gnl\|panTro1\|chr13 (80771097-80771385)
	37-304, gnl\|rn3\|chr9 (45569111-45569362)