Non-Coding RNA Search

rche28_b8.y1

Sequence:


               
               TCAACCACACATTGTTTCTCAACTCATTCAATTAAAAAAAATTAGAGTTCTTATTTGAGT
GAATATGGAGAAATAAAACATGCCAGTCTTTTTGTCTTTTCTTTTTATTACTGAAGATTA
AAAAATACTATATTATATCATCGTAAGTTTTATTATAGGTATTGAGGGTGTGCATAATTA
GCTCCTTTATAGAGAAGACTGCACAAGAATGAACATTTGGTTAATTTACCCCCCAACCCC
TAACAGTTTATTGTGAAAAATTTTGAAAACACACAACAGTTGAAAGAATTATTCAGTGAC
AGCCTATATACCCACAATCAAGATTGTGCCATTAACATTTTACTATACTTGCTTTATCAC
AGATCTTTCTATACATATATATGTATATAAAACTTACTTTGAGGAATTTTTTAAAAAAGT
CTGGAGTTccgtcgtggtgcagcagaaatgaatctgagactagcatccatgaccacatag
gtttgatccccggcctcctcagtgggttaagaattctttgtgagctgtggtgtaggtcac
agactcggcttggatcctgcggtgctgtggctgtggt

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCAACCACACATTGTTTCTCAACTCATTCAATTAAAAAAAATTAGAGTTCTTATTTGAGT
GAATATGGAGAAATAAAACATGCCAGTCTTTTTGTCTTTTCTTTTTATTACTGAAGATTA
AAAAATACTATATTATATCATCGTAAGTTTTATTATAGGTATTGAGGGTGTGCATAATTA
GCTCCTTTATAGAGAAGACTGCACAAGAATGAACATTTGGTTAATTTACCCCCCAACCCC
TAACAGTTTATTGTGAAAAATTTTGAAAACACACAACAGTTGAAAGAATTATTCAGTGAC
AGCCTATATACCCACAATCAAGATTGTGCCATTAACATTTTACTATACTTGCTTTATCAC
AGATCTTTCTATACATATATATGTATATAAAACTTACTTTGAGGAATTTTTTAAAAAAGT
CTGGAGTTccgtcgtggtgcagcagaaatgaatctgagactagcatccatgaccacatag
gtttgatccccggcctcctcagtgggttaagaattctttgtgagctgtggtgtaggtcac
agactcggcttggatcctgcggtgctgtggctgtggt

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-384, gnl|bosTau2|chr16 (16708917-16709302)
               

               
               1-384, gnl|Hg17|chr1 (222084467-222084024)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-384, gnl|bosTau2|chr16 (16708917-16709302)
               

               
               1-384, gnl|Hg17|chr1 (222084467-222084024)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               che (0.136314)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.136314)

	1-384, gnl\|bosTau2\|chr16 (16708917-16709302)
	1-384, gnl\|Hg17\|chr1 (222084467-222084024)