Non-Coding RNA Search

rche31_g23.y1

Sequence:


               
               CCCTGGAAGAGTAGTTTCGGGATTATATGGCTCCTGAATCCCTAGAACTTAAAGCACAAT
CTCCAAGGCAGGGCCTTTGGCATTTGGGGAATGTGGTAAATCCTGAAAGTGACCCCTCTG
TCTCCCTAGTTCACAGACGAGGAGACGGAGGCCCAGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCTGGAAGAGTAGTTTCGGGATTATATGGCTCCTGAATCCCTAGAACTTAAAGCACAAT
CTCCAAGGCAGGGCCTTTGGCATTTGGGGAATGTGGTAAATCCTGAAAGTGACCCCTCTG
TCTCCCTAGTTCACAGACGAGGAGACGGAGGCCCAGAC

Aligned organism(s): 9 entry(ies)

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Aligned organism(s): 9 entry(ies)

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               1-158, gnl|bosTau2|chr18 (38181986-38182139)
               

               
               1-158, gnl|canFam2|chr1 (112713789-112713166)
               

               
               1-158, gnl|hg17|chr19 (50979747-50980364)
               

               
               1-158, gnl|Hg17|chr19 (50979951-50979785)
               

               
               1-158, gnl|mm7|chr7 (16764361-16763864)
               

               
               1-158, gnl|Mm7|chr7 (16764179-16764321)
               

               
               1-158, gnl|panTro1|chr20 (48279266-48279883)
               

               
               1-158, gnl|rheMac2|chr19 (52273810-52274428)
               

               
               1-158, gnl|rn3|chr1 (78516435-78515901)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-158, gnl|bosTau2|chr18 (38181986-38182139)
               

               
               1-158, gnl|canFam2|chr1 (112713789-112713166)
               

               
               1-158, gnl|hg17|chr19 (50979747-50980364)
               

               
               1-158, gnl|Hg17|chr19 (50979951-50979785)
               

               
               1-158, gnl|mm7|chr7 (16764361-16763864)
               

               
               1-158, gnl|Mm7|chr7 (16764179-16764321)
               

               
               1-158, gnl|panTro1|chr20 (48279266-48279883)
               

               
               1-158, gnl|rheMac2|chr19 (52273810-52274428)
               

               
               1-158, gnl|rn3|chr1 (78516435-78515901)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               che (0.136314)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.136314)

	1-158, gnl\|bosTau2\|chr18 (38181986-38182139)
	1-158, gnl\|canFam2\|chr1 (112713789-112713166)
	1-158, gnl\|hg17\|chr19 (50979747-50980364)
	1-158, gnl\|Hg17\|chr19 (50979951-50979785)
	1-158, gnl\|mm7\|chr7 (16764361-16763864)
	1-158, gnl\|Mm7\|chr7 (16764179-16764321)
	1-158, gnl\|panTro1\|chr20 (48279266-48279883)
	1-158, gnl\|rheMac2\|chr19 (52273810-52274428)
	1-158, gnl\|rn3\|chr1 (78516435-78515901)