Non-Coding RNA Search

rche33_h24.y1

Sequence:


               
               TCTACCTGGCAGGAGGCTATAAGCACTGGAGTCATCTACATATACAAGAGCAGGTCTGAG
TGTCCACATGGACAGTCCAGAGGTTTGGAGAAGAGTCACTGGTTAGGGGGAACGGGCAGT
CCTGACTGGCGCTGCTTGTCTCAGATGGTGTCATGTGCGAGTGAAGGGGCTCCCCTGGTT
GTTTTGGACTCTCCATTTGAGCCAGTTGCAGCTGGTGTCAGTGCTCTTTCCTGGGCAAAC
AGTTATGACCTTGGTCCTGATAATTTCATTGTATCTTGTGAGCTTCCGGAATTTGCATTT
AAAAAAATGAAAGTAAGAGGGACTTACATCTCTAACCTTAAAAAAAAAACTCACTTTAAT
TTTTTTATTGTAGGTTTTTTTTAGGGGAAAAGTGAAATGTTGGTATGTGTCTTGATTTAA
CTTACAAACCTCTTTGTTATTAGATAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTACCTGGCAGGAGGCTATAAGCACTGGAGTCATCTACATATACAAGAGCAGGTCTGAG
TGTCCACATGGACAGTCCAGAGGTTTGGAGAAGAGTCACTGGTTAGGGGGAACGGGCAGT
CCTGACTGGCGCTGCTTGTCTCAGATGGTGTCATGTGCGAGTGAAGGGGCTCCCCTGGTT
GTTTTGGACTCTCCATTTGAGCCAGTTGCAGCTGGTGTCAGTGCTCTTTCCTGGGCAAAC
AGTTATGACCTTGGTCCTGATAATTTCATTGTATCTTGTGAGCTTCCGGAATTTGCATTT
AAAAAAATGAAAGTAAGAGGGACTTACATCTCTAACCTTAAAAAAAAAACTCACTTTAAT
TTTTTTATTGTAGGTTTTTTTTAGGGGAAAAGTGAAATGTTGGTATGTGTCTTGATTTAA
CTTACAAACCTCTTTGTTATTAGATAAG

Aligned organism(s): 9 entry(ies)

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Aligned organism(s): 9 entry(ies)

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               1-404, gnl|bosTau2|chr13 (34892885-34893280)
               

               
               1-404, gnl|canFam2|chr24 (20853648-20853303)
               

               
               1-404, gnl|echTel1|scaffold_294945 (7392-7745)
               

               
               1-404, gnl|hg17|chr20 (3402667-3403020)
               

               
               1-404, gnl|Hg17|chr20 (3402713-3403744)
               

               
               1-404, gnl|mm7|chr2 (130650381-130650689)
               

               
               1-404, gnl|panTro1|chr21 (3384031-3384384)
               

               
               1-404, gnl|rheMac2|chr10 (36802896-36803249)
               

               
               1-404, gnl|rn3|chr3 (118447780-118448091)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-404, gnl|bosTau2|chr13 (34892885-34893280)
               

               
               1-404, gnl|canFam2|chr24 (20853648-20853303)
               

               
               1-404, gnl|echTel1|scaffold_294945 (7392-7745)
               

               
               1-404, gnl|hg17|chr20 (3402667-3403020)
               

               
               1-404, gnl|Hg17|chr20 (3402713-3403744)
               

               
               1-404, gnl|mm7|chr2 (130650381-130650689)
               

               
               1-404, gnl|panTro1|chr21 (3384031-3384384)
               

               
               1-404, gnl|rheMac2|chr10 (36802896-36803249)
               

               
               1-404, gnl|rn3|chr3 (118447780-118448091)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               che (0.136314)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.136314)

	1-404, gnl\|bosTau2\|chr13 (34892885-34893280)
	1-404, gnl\|canFam2\|chr24 (20853648-20853303)
	1-404, gnl\|echTel1\|scaffold_294945 (7392-7745)
	1-404, gnl\|hg17\|chr20 (3402667-3403020)
	1-404, gnl\|Hg17\|chr20 (3402713-3403744)
	1-404, gnl\|mm7\|chr2 (130650381-130650689)
	1-404, gnl\|panTro1\|chr21 (3384031-3384384)
	1-404, gnl\|rheMac2\|chr10 (36802896-36803249)
	1-404, gnl\|rn3\|chr3 (118447780-118448091)