Non-Coding RNA Search

rche34_h7.y1

Sequence:


               
               AAGCAGCTGCTCATGATATATAATTCCTTTAAAATTATATATATGGATATTTTAATCTGT
CAAAATCTTGTTTGTTTTTGCTATTACTTGTTTGTATATTTCAGTTTTGATTAATAGATT
CCTGAAGTCCACCTTTATTGGTTTTAGCTGTAATCCCAAAGTTGCATGTTGCTAGTAATG
CGCTATATAACCACTGAAGTCAAATGGTATGTAAATGAGTTAAACTCAGTGTGAGGTTTT
TTGGGGGGAGGGGGCTGGGCGGAGAGGGGAGAGGGTGCGATTGTGGGGAAAGAATGCTTA
CTAATGAAAGTATATATATTTATATACATATGTACACACACAGAAGTGGATGACATTTTT
TTTCTCAATCTATTAATGAATTTTGACTCTGCTCTCAATGATTGCACTTTGTGGAGTAAT
CAGTTCTTCTGAGTGTGGTTTTTTGGGGTGAGTGAAGGGATATCTAATACATGAAAATAA
AAAAAATGTATTTGATTGCTTAAAGTCCTTAATGCCTTTTAAGGAACAGTGGTAGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGCAGCTGCTCATGATATATAATTCCTTTAAAATTATATATATGGATATTTTAATCTGT
CAAAATCTTGTTTGTTTTTGCTATTACTTGTTTGTATATTTCAGTTTTGATTAATAGATT
CCTGAAGTCCACCTTTATTGGTTTTAGCTGTAATCCCAAAGTTGCATGTTGCTAGTAATG
CGCTATATAACCACTGAAGTCAAATGGTATGTAAATGAGTTAAACTCAGTGTGAGGTTTT
TTGGGGGGAGGGGGCTGGGCGGAGAGGGGAGAGGGTGCGATTGTGGGGAAAGAATGCTTA
CTAATGAAAGTATATATATTTATATACATATGTACACACACAGAAGTGGATGACATTTTT
TTTCTCAATCTATTAATGAATTTTGACTCTGCTCTCAATGATTGCACTTTGTGGAGTAAT
CAGTTCTTCTGAGTGTGGTTTTTTGGGGTGAGTGAAGGGATATCTAATACATGAAAATAA
AAAAAATGTATTTGATTGCTTAAAGTCCTTAATGCCTTTTAAGGAACAGTGGTAGGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-537, gnl|bosTau2|chr2 (23439773-23439227)
               

               
               1-537, gnl|Hg17|chr2 (164416831-164416267)
               

               
               1-537, gnl|Mm7|chr2 (64027354-64026757)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-537, gnl|bosTau2|chr2 (23439773-23439227)
               

               
               1-537, gnl|Hg17|chr2 (164416831-164416267)
               

               
               1-537, gnl|Mm7|chr2 (64027354-64026757)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               che (0.136314)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.136314)

	1-537, gnl\|bosTau2\|chr2 (23439773-23439227)
	1-537, gnl\|Hg17\|chr2 (164416831-164416267)
	1-537, gnl\|Mm7\|chr2 (64027354-64026757)