Non-Coding RNA Search

rcje01_l3.y1

Sequence:


               
               ACAGCTGAAGTGGGCTGCCAAGAGAATTACGACTTCTGGGAGAGAATTCAGGAGCCATCT
CCTCACTCCAGAGTCCACCCATGGCTCAGCTGCGATCTGAGACCAAGGGACCCACCACTG
CCACTGTCAGCCCCAGAGTCATGCAAATCCTGCTGAATCTGCACCCGCAAAATTAGTGTC
TCACACATTGAGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACAGCTGAAGTGGGCTGCCAAGAGAATTACGACTTCTGGGAGAGAATTCAGGAGCCATCT
CCTCACTCCAGAGTCCACCCATGGCTCAGCTGCGATCTGAGACCAAGGGACCCACCACTG
CCACTGTCAGCCCCAGAGTCATGCAAATCCTGCTGAATCTGCACCCGCAAAATTAGTGTC
TCACACATTGAGCC

Aligned organism(s): 13 entry(ies)

More info

Aligned organism(s): 13 entry(ies)

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               1-185, gnl|bosTau2|chr22 (43556166-43556349)
               

               
               1-185, gnl|canFam2|chr14 (22638376-22638808)
               

               
               1-185, gnl|dasNov1|scaffold_2446 (118140-118565)
               

               
               1-185, gnl|echTel1|scaffold_295672 (8684-8247)
               

               
               1-185, gnl|hg17|chr7 (93464488-93464936)
               

               
               1-185, gnl|Hg17|chr7 (93464622-93464796)
               

               
               1-185, gnl|loxAfr1|scaffold_84377 (997-592)
               

               
               1-185, gnl|mm7|chr6 (4257827-4258257)
               

               
               1-185, gnl|Mm7|chr6 (4257956-4258120)
               

               
               1-185, gnl|oryCun1|scaffold_81427 (3354-3748)
               

               
               1-185, gnl|panTro1|chr6 (95061527-95061974)
               

               
               1-185, gnl|rheMac2|chr3 (123060535-123060088)
               

               
               1-185, gnl|rn3|chr4 (29225612-29226046)

Aligned organism(s): 13 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-185, gnl|bosTau2|chr22 (43556166-43556349)
               

               
               1-185, gnl|canFam2|chr14 (22638376-22638808)
               

               
               1-185, gnl|dasNov1|scaffold_2446 (118140-118565)
               

               
               1-185, gnl|echTel1|scaffold_295672 (8684-8247)
               

               
               1-185, gnl|hg17|chr7 (93464488-93464936)
               

               
               1-185, gnl|Hg17|chr7 (93464622-93464796)
               

               
               1-185, gnl|loxAfr1|scaffold_84377 (997-592)
               

               
               1-185, gnl|mm7|chr6 (4257827-4258257)
               

               
               1-185, gnl|Mm7|chr6 (4257956-4258120)
               

               
               1-185, gnl|oryCun1|scaffold_81427 (3354-3748)
               

               
               1-185, gnl|panTro1|chr6 (95061527-95061974)
               

               
               1-185, gnl|rheMac2|chr3 (123060535-123060088)
               

               
               1-185, gnl|rn3|chr4 (29225612-29226046)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cje (0.165235)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cje (0.165235)

	1-185, gnl\|bosTau2\|chr22 (43556166-43556349)
	1-185, gnl\|canFam2\|chr14 (22638376-22638808)
	1-185, gnl\|dasNov1\|scaffold_2446 (118140-118565)
	1-185, gnl\|echTel1\|scaffold_295672 (8684-8247)
	1-185, gnl\|hg17\|chr7 (93464488-93464936)
	1-185, gnl\|Hg17\|chr7 (93464622-93464796)
	1-185, gnl\|loxAfr1\|scaffold_84377 (997-592)
	1-185, gnl\|mm7\|chr6 (4257827-4258257)
	1-185, gnl\|Mm7\|chr6 (4257956-4258120)
	1-185, gnl\|oryCun1\|scaffold_81427 (3354-3748)
	1-185, gnl\|panTro1\|chr6 (95061527-95061974)
	1-185, gnl\|rheMac2\|chr3 (123060535-123060088)
	1-185, gnl\|rn3\|chr4 (29225612-29226046)