Non-Coding RNA Search

rcje03_o7.y1

Sequence:


               
               aggcgtatacttcaccctcctccaagcctcagaatattacgaagcaccattcacaatctc
cgacggagtgtatggatccactttctttgtggctacaggatttcacgggttgcacgtaat
catcggatctactttcctagcagtgtgcttactacgacaactaaaattccacttcacatc
caaccaccacttcggctttgaagccgcagcctgatactgacacttcgtagacgtagtttg
actattcctttacgtatcaatctattgatgaggatcctAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAACTCGCGGGCCCACCCTGCCTGACAGCGGGGGCGGTGGGGACGACTCCTCCG
GTGACATCCGCTCGCTACACCTGCCCGACGAGTTGCTGTCCTTCGACTACAGTGTACCCG
AGATCCTGGACACCGTGTCCAACGTGGACTATTTTTTCAACTTCAAGGCGCTGGACGAGG
AGCCACCACCGCAACCAGGCCCCCCGGCTGCCACCGCCGCGGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               aggcgtatacttcaccctcctccaagcctcagaatattacgaagcaccattcacaatctc
cgacggagtgtatggatccactttctttgtggctacaggatttcacgggttgcacgtaat
catcggatctactttcctagcagtgtgcttactacgacaactaaaattccacttcacatc
caaccaccacttcggctttgaagccgcagcctgatactgacacttcgtagacgtagtttg
actattcctttacgtatcaatctattgatgaggatcctAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAACTCGCGGGCCCACCCTGCCTGACAGCGGGGGCGGTGGGGACGACTCCTCCG
GTGACATCCGCTCGCTACACCTGCCCGACGAGTTGCTGTCCTTCGACTACAGTGTACCCG
AGATCCTGGACACCGTGTCCAACGTGGACTATTTTTTCAACTTCAAGGCGCTGGACGAGG
AGCCACCACCGCAACCAGGCCCCCCGGCTGCCACCGCCGCGGCC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               315-524, gnl|bosTau2|chr7 (13277768-13277977)
               

               
               315-524, gnl|Hg17|chr19 (5734327-5734124)
               

               
               315-524, gnl|Mm7|chr17 (54982876-54983088)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               315-524, gnl|bosTau2|chr7 (13277768-13277977)
               

               
               315-524, gnl|Hg17|chr19 (5734327-5734124)
               

               
               315-524, gnl|Mm7|chr17 (54982876-54983088)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cje (0.165235)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cje (0.165235)

	315-524, gnl\|bosTau2\|chr7 (13277768-13277977)
	315-524, gnl\|Hg17\|chr19 (5734327-5734124)
	315-524, gnl\|Mm7\|chr17 (54982876-54983088)