rcje11_o16.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCTTTGAAACCAAGTTCTTGTCTCAGATTGAAAGCGATCGGCTGGCCCTCCTCCAGGTCA GGGGGATCCTGCAGCAGCTTGGCCTGGACAGCACATGTGAGGACAGCATTGTGGTGAAGG AGGTGTGTGGAGCTGTGTCCCGGCGGGCAGCCCAGCTCTATGGCGCTGGCCTGGCCGCCA TTGTGGAAAAAAAGAGGGAAGACCAGGGGCTTGAGCACCTGAAGATCACCGTGGGTGTGG ATGGCACCCTGTACAAGCTGCACCCACACTTTTCTCGGATATTGCAGGAAACTGTAAAAG AATTAGCTCCTCGCTGTGATGTGATGTTCATGCTGTCAGAAGATGGGAGTGGAAAAGGAG CAGCTCTGATCACTGCTGTGGCCAAGAGGTTACAGCAGGCCCGGAAGGACAACTAGGAAC CCCTTGGGTCTGGACCTACTGTGCCTTGGCTACTGACCAGCCTTTCCCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCTTTGAAACCAAGTTCTTGTCTCAGATTGAAAGCGATCGGCTGGCCCTCCTCCAGGTCA GGGGGATCCTGCAGCAGCTTGGCCTGGACAGCACATGTGAGGACAGCATTGTGGTGAAGG AGGTGTGTGGAGCTGTGTCCCGGCGGGCAGCCCAGCTCTATGGCGCTGGCCTGGCCGCCA TTGTGGAAAAAAAGAGGGAAGACCAGGGGCTTGAGCACCTGAAGATCACCGTGGGTGTGG ATGGCACCCTGTACAAGCTGCACCCACACTTTTCTCGGATATTGCAGGAAACTGTAAAAG AATTAGCTCCTCGCTGTGATGTGATGTTCATGCTGTCAGAAGATGGGAGTGGAAAAGGAG CAGCTCTGATCACTGCTGTGGCCAAGAGGTTACAGCAGGCCCGGAAGGACAACTAGGAAC CCCTTGGGTCTGGACCTACTGTGCCTTGGCTACTGACCAGCCTTTCCCT |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 112-231, + strand, RNAz p=0.617413 | |
| 348-467, + strand, RNAz p=0.905868 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 112-231, + strand, RNAz p=0.617413 | |
| 348-467, + strand, RNAz p=0.905868 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 3' of BC021278, + |
| Aligned organism(s): 5 entry(ies) | More info |
| Aligned organism(s): 5 entry(ies) | Help | Less info |
| 33-268, gnl|bosTau2|chr28 (20268705-20268470) | |
| 33-268, gnl|Hg17|chr10 (70695345-70695580) | |
| 33-268, gnl|Mm7|chr10 (61904651-61904416) | |
| 269-467, gnl|bosTau2|chr28 (20264741-20264543) | |
| 269-467, gnl|Hg17|chr10 (70696372-70696569) |
| Aligned organism(s): 5 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 33-268, gnl|bosTau2|chr28 (20268705-20268470) | |
| 33-268, gnl|Hg17|chr10 (70695345-70695580) | |
| 33-268, gnl|Mm7|chr10 (61904651-61904416) | |
| 269-467, gnl|bosTau2|chr28 (20264741-20264543) | |
| 269-467, gnl|Hg17|chr10 (70696372-70696569) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cje (0.165235) |