Non-Coding RNA Search

rcki014_d12.y1

Sequence:


               
               GTTCTTTGGAACCCGCCCCAAAGAATCTTACAATGTCCAGCTCGAACTTCCAGCCCGGGT
GGGCTTCAGCCGAGGGGAGGTCGATGACCTGAAGAGAGAGGGACAGTATTTCAGCTTGAC
TAGCACTGAACAGTCTGTGAAAAATCTCTACCAGTAAGTAACACAGGGCTTAAGCCCTTT
CCTGTGGGAATGTGAGGACCCTTAGGAGCTGACCAAACTTGAGTGGCCAAAGACCATTAA
ATAATATCTTGCTGGTTTCTAAGCAAGACATCAGGTCAAAACCAGGAACTAGACTCGACC
CTGGGAGGAATGTGTTGACCAAAATATGAAAGGTCTTTTATTTTTCCTACCTTATTGGCT
AAAGATAGCAGAAATGCAGCACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTTTCTGTAGTGTTGGCCCAGCCACTGAGGCTTGCTATGGAAAACATTGCTCTTG
GAACCACATAAAAATAGCCAGTAATATAACTGCCCAGGTTGAGGTTTTTCCAGGTTAATC
ATTTCAGGAGGAGACGTTGTGAGTTAGTCTTTTAGACAGAGATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTCTTTGGAACCCGCCCCAAAGAATCTTACAATGTCCAGCTCGAACTTCCAGCCCGGGT
GGGCTTCAGCCGAGGGGAGGTCGATGACCTGAAGAGAGAGGGACAGTATTTCAGCTTGAC
TAGCACTGAACAGTCTGTGAAAAATCTCTACCAGTAAGTAACACAGGGCTTAAGCCCTTT
CCTGTGGGAATGTGAGGACCCTTAGGAGCTGACCAAACTTGAGTGGCCAAAGACCATTAA
ATAATATCTTGCTGGTTTCTAAGCAAGACATCAGGTCAAAACCAGGAACTAGACTCGACC
CTGGGAGGAATGTGTTGACCAAAATATGAAAGGTCTTTTATTTTTCCTACCTTATTGGCT
AAAGATAGCAGAAATGCAGCACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTTTCTGTAGTGTTGGCCCAGCCACTGAGGCTTGCTATGGAAAACATTGCTCTTG
GAACCACATAAAAATAGCCAGTAATATAACTGCCCAGGTTGAGGTTTTTCCAGGTTAATC
ATTTCAGGAGGAGACGTTGTGAGTTAGTCTTTTAGACAGAGATG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-433, gnl|bosTau2|chr10 (29585751-29586187)
               

               
               1-433, gnl|Hg17|chr14 (51596744-51596344)
               

               
               1-433, gnl|Mm7|chr14 (17421728-17422114)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-433, gnl|bosTau2|chr10 (29585751-29586187)
               

               
               1-433, gnl|Hg17|chr14 (51596744-51596344)
               

               
               1-433, gnl|Mm7|chr14 (17421728-17422114)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cki (0.165235)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cki (0.165235)

	1-433, gnl\|bosTau2\|chr10 (29585751-29586187)
	1-433, gnl\|Hg17\|chr14 (51596744-51596344)
	1-433, gnl\|Mm7\|chr14 (17421728-17422114)