Non-Coding RNA Search

rcki01_p23.y1

Sequence:


               
               TAAGATTTCCATGCTTTGTCAGCATTAAGAAGGCTGCTTTAGAGATGCTGTCATTTGATT
ACTCACCCTGCCTTCATACTCTGGGGACAGAAGGGGAGGCCATTCTCAATGGTGCCAGAA
GCCTCTTCCTATAAGCCTGTGTTCTACTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAAGATTTCCATGCTTTGTCAGCATTAAGAAGGCTGCTTTAGAGATGCTGTCATTTGATT
ACTCACCCTGCCTTCATACTCTGGGGACAGAAGGGGAGGCCATTCTCAATGGTGCCAGAA
GCCTCTTCCTATAAGCCTGTGTTCTACTC

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

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               1-149, gnl|bosTau2|chr9 (21542172-21542320)
               

               
               1-149, gnl|canFam2|chr20 (46343754-46343298)
               

               
               1-149, gnl|dasNov1|scaffold_19194 (416-6)
               

               
               1-149, gnl|hg17|chr3 (45028423-45028874)
               

               
               1-149, gnl|Hg17|chr3 (45028475-45028615)
               

               
               1-149, gnl|mm7|chr9 (122842557-122842974)
               

               
               1-149, gnl|monDom2|scaffold_7 (65631167-65631590)
               

               
               1-149, gnl|oryCun1|scaffold_176268 (99489-99885)
               

               
               1-149, gnl|panTro1|chr2 (46347869-46348320)
               

               
               1-149, gnl|rheMac2|chr2 (91520787-91520332)
               

               
               1-149, gnl|rn3|chr8 (127913956-127914359)

Aligned organism(s): 11 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-149, gnl|bosTau2|chr9 (21542172-21542320)
               

               
               1-149, gnl|canFam2|chr20 (46343754-46343298)
               

               
               1-149, gnl|dasNov1|scaffold_19194 (416-6)
               

               
               1-149, gnl|hg17|chr3 (45028423-45028874)
               

               
               1-149, gnl|Hg17|chr3 (45028475-45028615)
               

               
               1-149, gnl|mm7|chr9 (122842557-122842974)
               

               
               1-149, gnl|monDom2|scaffold_7 (65631167-65631590)
               

               
               1-149, gnl|oryCun1|scaffold_176268 (99489-99885)
               

               
               1-149, gnl|panTro1|chr2 (46347869-46348320)
               

               
               1-149, gnl|rheMac2|chr2 (91520787-91520332)
               

               
               1-149, gnl|rn3|chr8 (127913956-127914359)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cki (0.165235)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cki (0.165235)

	1-149, gnl\|bosTau2\|chr9 (21542172-21542320)
	1-149, gnl\|canFam2\|chr20 (46343754-46343298)
	1-149, gnl\|dasNov1\|scaffold_19194 (416-6)
	1-149, gnl\|hg17\|chr3 (45028423-45028874)
	1-149, gnl\|Hg17\|chr3 (45028475-45028615)
	1-149, gnl\|mm7\|chr9 (122842557-122842974)
	1-149, gnl\|monDom2\|scaffold_7 (65631167-65631590)
	1-149, gnl\|oryCun1\|scaffold_176268 (99489-99885)
	1-149, gnl\|panTro1\|chr2 (46347869-46348320)
	1-149, gnl\|rheMac2\|chr2 (91520787-91520332)
	1-149, gnl\|rn3\|chr8 (127913956-127914359)