Non-Coding RNA Search

rcki10_h9.y1

Sequence:


               
               GATACACCGAGGACAGCCATGAATCCTGCGTGTGTGGGGCACACAGGTTTGGGGCGTGGA
TGCAACAGGCAGGAGAGCAGTAACCTGCATGTCACGCCAAGGAGTTTTGGCTTTTATCTA
AGGGTAATGAGGAACAGTGAATGTGCTCAGCAGAGAGGCAGTGGTGATCACGTTTTCATT
TAGGCAGGTTTCTTTACCAGTGAAAGAAGCTCAAACCAACTGAGGCAGAAAGAGAACTTA
ATTAGTTCCTGTATAGGCCAGGCTCATTGGGCATCCAGGTCCCCTCCCTCTCATCTCCAC
GTCTTGCACATGCCAGCCCCACTCTCCCAGGCTTGCTGCTTCCGCGTACTGGCTCTCAGA
GTTAGCAACGTTTCACAGCCCTCAGGTTCCTGACCCAAAAGAACCTGAGGTGGGAATGCA
GGAGTTTGATTAAGAGGCCAATCAGTTGTTTagatggccaaaaaacacatgaaaagatac
tcaacatcactaattgttagagaaatgtaaatcaaaactgcaatgagctatcacttcaca
cccgtcagaatggccatcatcaaaaagtctacaaacaatgctggagagggtgcgg

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATACACCGAGGACAGCCATGAATCCTGCGTGTGTGGGGCACACAGGTTTGGGGCGTGGA
TGCAACAGGCAGGAGAGCAGTAACCTGCATGTCACGCCAAGGAGTTTTGGCTTTTATCTA
AGGGTAATGAGGAACAGTGAATGTGCTCAGCAGAGAGGCAGTGGTGATCACGTTTTCATT
TAGGCAGGTTTCTTTACCAGTGAAAGAAGCTCAAACCAACTGAGGCAGAAAGAGAACTTA
ATTAGTTCCTGTATAGGCCAGGCTCATTGGGCATCCAGGTCCCCTCCCTCTCATCTCCAC
GTCTTGCACATGCCAGCCCCACTCTCCCAGGCTTGCTGCTTCCGCGTACTGGCTCTCAGA
GTTAGCAACGTTTCACAGCCCTCAGGTTCCTGACCCAAAAGAACCTGAGGTGGGAATGCA
GGAGTTTGATTAAGAGGCCAATCAGTTGTTTagatggccaaaaaacacatgaaaagatac
tcaacatcactaattgttagagaaatgtaaatcaaaactgcaatgagctatcacttcaca
cccgtcagaatggccatcatcaaaaagtctacaaacaatgctggagagggtgcgg

Aligned organism(s): 7 entry(ies)

More info

Aligned organism(s): 7 entry(ies)

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               1-121, gnl|bosTau2|chr13 (49236927-49237047)
               

               
               1-121, gnl|canFam2|chr24 (29066418-29066766)
               

               
               1-121, gnl|echTel1|scaffold_162768 (845-433)
               

               
               1-121, gnl|hg17|chr20 (35556703-35557145)
               

               
               1-121, gnl|Hg17|chr20 (35556865-35556719)
               

               
               1-121, gnl|panTro1|chr21 (37883871-37884313)
               

               
               1-121, gnl|rheMac2|chr10 (26970472-26970036)

Aligned organism(s): 7 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-121, gnl|bosTau2|chr13 (49236927-49237047)
               

               
               1-121, gnl|canFam2|chr24 (29066418-29066766)
               

               
               1-121, gnl|echTel1|scaffold_162768 (845-433)
               

               
               1-121, gnl|hg17|chr20 (35556703-35557145)
               

               
               1-121, gnl|Hg17|chr20 (35556865-35556719)
               

               
               1-121, gnl|panTro1|chr21 (37883871-37884313)
               

               
               1-121, gnl|rheMac2|chr10 (26970472-26970036)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               cki (0.165235)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cki (0.165235)

	1-121, gnl\|bosTau2\|chr13 (49236927-49237047)
	1-121, gnl\|canFam2\|chr24 (29066418-29066766)
	1-121, gnl\|echTel1\|scaffold_162768 (845-433)
	1-121, gnl\|hg17\|chr20 (35556703-35557145)
	1-121, gnl\|Hg17\|chr20 (35556865-35556719)
	1-121, gnl\|panTro1\|chr21 (37883871-37884313)
	1-121, gnl\|rheMac2\|chr10 (26970472-26970036)