Non-Coding RNA Search

rcki32_j14.y1

Sequence:


               
               CATGGTTTTGTATTTCTGTTAACATTGTCTTGGATTATATGATTTTAAGACCTGTAACCT
CAATTTACAAAGTAAGAGAGTTGGAAAAGCAAATCTAGACCCCAGGGTTTCTGACATTTA
TTCTTGAAGTCTGTTATTAATCTCTTGTGTCTGTCCTGAACAGATTCCCATTCTGTTCCT
GTCGGTGACTATACTAGAGGATCAGTATATTTGATAAATATTTAGATGTAAGGCTTACAA
AACTGATCAAAAGAAGGGAGCACAGGAGTTTGGAATAACTCCAAGGCTTTTGCTTTGGGA
GATTAGATGAGTAAGAATAAGCCTGGGATGGTGTTTCTGTCAGATGCCACTCACAAGCCT
ACATGATAGGCTGGGAAATGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATGGTTTTGTATTTCTGTTAACATTGTCTTGGATTATATGATTTTAAGACCTGTAACCT
CAATTTACAAAGTAAGAGAGTTGGAAAAGCAAATCTAGACCCCAGGGTTTCTGACATTTA
TTCTTGAAGTCTGTTATTAATCTCTTGTGTCTGTCCTGAACAGATTCCCATTCTGTTCCT
GTCGGTGACTATACTAGAGGATCAGTATATTTGATAAATATTTAGATGTAAGGCTTACAA
AACTGATCAAAAGAAGGGAGCACAGGAGTTTGGAATAACTCCAAGGCTTTTGCTTTGGGA
GATTAGATGAGTAAGAATAAGCCTGGGATGGTGTTTCTGTCAGATGCCACTCACAAGCCT
ACATGATAGGCTGGGAAATGG

Aligned organism(s): 10 entry(ies)

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Aligned organism(s): 10 entry(ies)

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               58-333, gnl|bosTau2|chr1 (34676432-34676710)
               

               
               58-333, gnl|canFam2|chr33 (28596621-28596900)
               

               
               58-333, gnl|dasNov1|scaffold_9577 (28731-29088)
               

               
               58-333, gnl|echTel1|scaffold_279126 (46346-46684)
               

               
               58-333, gnl|hg17|chr3 (123614352-123614718)
               

               
               58-333, gnl|Mm7|chr16 (35716812-35717061)
               

               
               58-333, gnl|oryCun1|scaffold_173664 (66632-66907)
               

               
               58-333, gnl|panTro1|chr2 (125304158-125304525)
               

               
               58-333, gnl|rheMac2|chr2 (42413283-42413645)
               

               
               58-333, gnl|rn3|chr11 (66603601-66603915)

Aligned organism(s): 10 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               58-333, gnl|bosTau2|chr1 (34676432-34676710)
               

               
               58-333, gnl|canFam2|chr33 (28596621-28596900)
               

               
               58-333, gnl|dasNov1|scaffold_9577 (28731-29088)
               

               
               58-333, gnl|echTel1|scaffold_279126 (46346-46684)
               

               
               58-333, gnl|hg17|chr3 (123614352-123614718)
               

               
               58-333, gnl|Mm7|chr16 (35716812-35717061)
               

               
               58-333, gnl|oryCun1|scaffold_173664 (66632-66907)
               

               
               58-333, gnl|panTro1|chr2 (125304158-125304525)
               

               
               58-333, gnl|rheMac2|chr2 (42413283-42413645)
               

               
               58-333, gnl|rn3|chr11 (66603601-66603915)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cki (0.165235)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cki (0.165235)

	58-333, gnl\|bosTau2\|chr1 (34676432-34676710)
	58-333, gnl\|canFam2\|chr33 (28596621-28596900)
	58-333, gnl\|dasNov1\|scaffold_9577 (28731-29088)
	58-333, gnl\|echTel1\|scaffold_279126 (46346-46684)
	58-333, gnl\|hg17\|chr3 (123614352-123614718)
	58-333, gnl\|Mm7\|chr16 (35716812-35717061)
	58-333, gnl\|oryCun1\|scaffold_173664 (66632-66907)
	58-333, gnl\|panTro1\|chr2 (125304158-125304525)
	58-333, gnl\|rheMac2\|chr2 (42413283-42413645)
	58-333, gnl\|rn3\|chr11 (66603601-66603915)