Non-Coding RNA Search

rcli27b_p4.y1

Sequence:


               
               TTGAATTAGCTGCAGCATTTTGTATGGATGCATATATATGACACCCAGGCTGACGACAAC
GGCTTTTGAAGCATTTAATTCCTCTTAAATGGACTCAGTATCCATGGAATGTGCTGTTTC
AGTGTTTCTGAATTTTCTACGTGCCATTTTTACAGGTCCATTTGTTTCTGATGTGATGTG
GTGAACGATCCTGTTGGTTATTTTTTTTAAGAAAACAAATGTATATATGACTAAGCAAAC
GAATAAATTATTGAAAAAATATACTTTATGAACCATGCAGCCCACTGTTCAAAAGGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGAATTAGCTGCAGCATTTTGTATGGATGCATATATATGACACCCAGGCTGACGACAAC
GGCTTTTGAAGCATTTAATTCCTCTTAAATGGACTCAGTATCCATGGAATGTGCTGTTTC
AGTGTTTCTGAATTTTCTACGTGCCATTTTTACAGGTCCATTTGTTTCTGATGTGATGTG
GTGAACGATCCTGTTGGTTATTTTTTTTAAGAAAACAAATGTATATATGACTAAGCAAAC
GAATAAATTATTGAAAAAATATACTTTATGAACCATGCAGCCCACTGTTCAAAAGGAA

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

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               1-298, gnl|bosTau2|chr8 (39413922-39414216)
               

               
               1-298, gnl|canFam2|chr25 (33801976-33801226)
               

               
               1-298, gnl|dasNov1|scaffold_11492 (16687-15923)
               

               
               1-298, gnl|echTel1|scaffold_308424 (92794-92007)
               

               
               1-298, gnl|hg17|chr8 (26667218-26667979)
               

               
               1-298, gnl|Hg17|chr8 (26667693-26667394)
               

               
               1-298, gnl|loxAfr1|scaffold_178037 (325-1073)
               

               
               1-298, gnl|mm7|chr14 (61601001-61600267)
               

               
               1-298, gnl|Mm7|chr14 (61600522-61600823)
               

               
               1-298, gnl|monDom2|scaffold_61 (5859410-5858614)
               

               
               1-298, gnl|oryCun1|scaffold_199807 (34737-35502)
               

               
               1-298, gnl|panTro1|chr7 (27641258-27642022)
               

               
               1-298, gnl|rheMac2|chr8 (26906932-26907701)
               

               
               1-298, gnl|rn3|chr15 (46292585-46291862)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-298, gnl|bosTau2|chr8 (39413922-39414216)
               

               
               1-298, gnl|canFam2|chr25 (33801976-33801226)
               

               
               1-298, gnl|dasNov1|scaffold_11492 (16687-15923)
               

               
               1-298, gnl|echTel1|scaffold_308424 (92794-92007)
               

               
               1-298, gnl|hg17|chr8 (26667218-26667979)
               

               
               1-298, gnl|Hg17|chr8 (26667693-26667394)
               

               
               1-298, gnl|loxAfr1|scaffold_178037 (325-1073)
               

               
               1-298, gnl|mm7|chr14 (61601001-61600267)
               

               
               1-298, gnl|Mm7|chr14 (61600522-61600823)
               

               
               1-298, gnl|monDom2|scaffold_61 (5859410-5858614)
               

               
               1-298, gnl|oryCun1|scaffold_199807 (34737-35502)
               

               
               1-298, gnl|panTro1|chr7 (27641258-27642022)
               

               
               1-298, gnl|rheMac2|chr8 (26906932-26907701)
               

               
               1-298, gnl|rn3|chr15 (46292585-46291862)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cli (0.152812)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cli (0.152812)

	1-298, gnl\|bosTau2\|chr8 (39413922-39414216)
	1-298, gnl\|canFam2\|chr25 (33801976-33801226)
	1-298, gnl\|dasNov1\|scaffold_11492 (16687-15923)
	1-298, gnl\|echTel1\|scaffold_308424 (92794-92007)
	1-298, gnl\|hg17\|chr8 (26667218-26667979)
	1-298, gnl\|Hg17\|chr8 (26667693-26667394)
	1-298, gnl\|loxAfr1\|scaffold_178037 (325-1073)
	1-298, gnl\|mm7\|chr14 (61601001-61600267)
	1-298, gnl\|Mm7\|chr14 (61600522-61600823)
	1-298, gnl\|monDom2\|scaffold_61 (5859410-5858614)
	1-298, gnl\|oryCun1\|scaffold_199807 (34737-35502)
	1-298, gnl\|panTro1\|chr7 (27641258-27642022)
	1-298, gnl\|rheMac2\|chr8 (26906932-26907701)
	1-298, gnl\|rn3\|chr15 (46292585-46291862)