rcly11b_g21.y1
|
GACAAGGACACCTACGTCTGCATGGCCCGCAACTCCTTGGGCTCAGTCAGCACCATGGGG
CAGCTGCAGCCAGAAGGTGTGCACGTGGTAGCTGAGCCAGGGCTGGATGTGCCTGAAGGC
ACAGCGCTGAACCTGAGCTGTCGCCTCCCTAGTGGCCCTGGGCACATAGGCAACTCCACC
TTTGCTTGGTTCCGGAACGGTCGGCAGCTACACACAGAGTCTGTGCCCACCCTTACCTTC
ACCCATGTGGCCCGCGCCCAAGCTGGCTTGTACCACTGCCAGGCTGAGCTCCCCGCCGGG
GCTGCCACCTCTGCTCCAGTCTTGCTCCGGGTGCTCTACCCTCCCAAGACGCCCACCATG
ACTGTTTTTGTGGAGCCCGAGGGTGGCATCCAGGGCATTCTGGACTGCCGAGTGGACAGT
GAGCCCCTAGCCAGCCTGACCCTCCACCTGGGCAGTCGGCTGGTGGCCTCCAGCCAGCCC
CAGGCTGCCCC
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GACAAGGACACCTACGTCTGCATGGCCCGCAACTCCTTGGGCTCAGTCAGCACCATGGGG
CAGCTGCAGCCAGAAGGTGTGCACGTGGTAGCTGAGCCAGGGCTGGATGTGCCTGAAGGC
ACAGCGCTGAACCTGAGCTGTCGCCTCCCTAGTGGCCCTGGGCACATAGGCAACTCCACC
TTTGCTTGGTTCCGGAACGGTCGGCAGCTACACACAGAGTCTGTGCCCACCCTTACCTTC
ACCCATGTGGCCCGCGCCCAAGCTGGCTTGTACCACTGCCAGGCTGAGCTCCCCGCCGGG
GCTGCCACCTCTGCTCCAGTCTTGCTCCGGGTGCTCTACCCTCCCAAGACGCCCACCATG
ACTGTTTTTGTGGAGCCCGAGGGTGGCATCCAGGGCATTCTGGACTGCCGAGTGGACAGT
GAGCCCCTAGCCAGCCTGACCCTCCACCTGGGCAGTCGGCTGGTGGCCTCCAGCCAGCCC
CAGGCTGCCCC
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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70-337, gnl|bosTau2|chr13 (33678076-33677809) |
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70-337, gnl|Hg17|chr20 (3620260-3619987) |
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70-337, gnl|Mm7|chr2 (130813712-130813445) |
| |
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340-491, gnl|bosTau2|chr13 (33677052-33676901) |
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340-491, gnl|canFam2|chr24 (20655344-20654935) |
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340-491, gnl|dasNov1|scaffold_195100 (4455-4122) |
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340-491, gnl|echTel1|scaffold_169354 (1826-2208) |
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340-491, gnl|hg17|chr20 (3618526-3618924) |
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340-491, gnl|Hg17|chr20 (3618909-3618758) |
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340-491, gnl|loxAfr1|scaffold_16085 (50864-50480) |
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340-491, gnl|mm7|chr2 (130811863-130812257) |
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340-491, gnl|Mm7|chr2 (130812242-130812091) |
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340-491, gnl|monDom2|scaffold_157 (1620232-1620636) |
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340-491, gnl|oryCun1|scaffold_203294 (40087-40481) |
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340-491, gnl|panTro1|chr21 (3597830-3598228) |
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340-491, gnl|rheMac2|chr10 (37019079-37019476) |
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340-491, gnl|rn3|chr3 (118677254-118677649) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
70-337, gnl|bosTau2|chr13 (33678076-33677809) |
|
70-337, gnl|Hg17|chr20 (3620260-3619987) |
|
70-337, gnl|Mm7|chr2 (130813712-130813445) |
| |
|
340-491, gnl|bosTau2|chr13 (33677052-33676901) |
|
340-491, gnl|canFam2|chr24 (20655344-20654935) |
|
340-491, gnl|dasNov1|scaffold_195100 (4455-4122) |
|
340-491, gnl|echTel1|scaffold_169354 (1826-2208) |
|
340-491, gnl|hg17|chr20 (3618526-3618924) |
|
340-491, gnl|Hg17|chr20 (3618909-3618758) |
|
340-491, gnl|loxAfr1|scaffold_16085 (50864-50480) |
|
340-491, gnl|mm7|chr2 (130811863-130812257) |
|
340-491, gnl|Mm7|chr2 (130812242-130812091) |
|
340-491, gnl|monDom2|scaffold_157 (1620232-1620636) |
|
340-491, gnl|oryCun1|scaffold_203294 (40087-40481) |
|
340-491, gnl|panTro1|chr21 (3597830-3598228) |
|
340-491, gnl|rheMac2|chr10 (37019079-37019476) |
|
340-491, gnl|rn3|chr3 (118677254-118677649) |