Non-Coding RNA Search

rcly18b_l2.y1

Sequence:


               
               CAAGCATGAGGAGGATGCTGGAGTGAGGTGCTCTGGTCAAAGAACCACATCTCCCCCTAC
TATAGCAGGGGCCAGACCAGGCTCCAGTCCTATCCCTGGCATTTTTTCCCTTCCCGAGAT
CCTCTGCCTCATCCTGGGGGCTCTTCTCTTCCTGGTCCTCATCATCCTGGTGACACAGCT
GCTCAGATGGAGAGCAGAGCGCAGAGCCTTATCCGGCTTGGAAGGGGCTCTCGCTGAGGC
CGTGTATGAAGAGATCGATTACCTTGTAACACCGAAGGAGGATCTGCTGGGCAGCCCAGG
GTTCCTGTCAGATGACTCAGTGACGAAACTGCCATATTACACCGGGGAAGGTGAAGAGAA
CAGAGACTCCAAATCTGCTTCAGATGAACCCCCAACCCAGGGGATTGATGCCCCCAGTGA
GGGTTATGATGATGCTGAAGAGGTACCAGTGCCCGGGGCTCCTGCTGCCTCTCTGATGAG
CAAGAGGGAAGTGCCCCCAGAAGAGGAGAGTGGGATGCGGGTCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAAGCATGAGGAGGATGCTGGAGTGAGGTGCTCTGGTCAAAGAACCACATCTCCCCCTAC
TATAGCAGGGGCCAGACCAGGCTCCAGTCCTATCCCTGGCATTTTTTCCCTTCCCGAGAT
CCTCTGCCTCATCCTGGGGGCTCTTCTCTTCCTGGTCCTCATCATCCTGGTGACACAGCT
GCTCAGATGGAGAGCAGAGCGCAGAGCCTTATCCGGCTTGGAAGGGGCTCTCGCTGAGGC
CGTGTATGAAGAGATCGATTACCTTGTAACACCGAAGGAGGATCTGCTGGGCAGCCCAGG
GTTCCTGTCAGATGACTCAGTGACGAAACTGCCATATTACACCGGGGAAGGTGAAGAGAA
CAGAGACTCCAAATCTGCTTCAGATGAACCCCCAACCCAGGGGATTGATGCCCCCAGTGA
GGGTTATGATGATGCTGAAGAGGTACCAGTGCCCGGGGCTCCTGCTGCCTCTCTGATGAG
CAAGAGGGAAGTGCCCCCAGAAGAGGAGAGTGGGATGCGGGTCTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q95JE2_SHEEP

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q95JE2_SHEEP

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               67-206, + strand, RNAz p=0.999987

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               67-206, + strand, RNAz p=0.999987

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               67-206, gnl|bosTau2|chr5 (61309600-61309739)
               

               
               67-206, gnl|Mm7|chr6 (124346752-124346619)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               67-206, gnl|bosTau2|chr5 (61309600-61309739)
               

               
               67-206, gnl|Mm7|chr6 (124346752-124346619)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cly (0.120642)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cly (0.120642)

	67-206, gnl\|bosTau2\|chr5 (61309600-61309739)
	67-206, gnl\|Mm7\|chr6 (124346752-124346619)