Non-Coding RNA Search

rcly21b_g13.y1

Sequence:


               
               TAGACAAGCACTCGACCCCTGTGGCCGCCAGGCAGATGCACAAGTGCACACGGATGACAT
GCATGTTCCCACACACGTACCTGCTCTCGCCAACTGAGTTCCCACGCTGACCAACTGAGC
TGCCTGGGAGCTTGGAGAGGAAGGTTCCAAAGGGCACAAGCCGTTGAGTAGATGCCAGAG
AATTCTGAATGGAAAACCTAGGCCAGGACTTTCACCAGCATCGCAGCGGGAGGCCTGGGG
TGTTCCTCTGTGGGTCTTCAGCCCCGTGTTCCAGCTCTGACTTTTGAAAAGGACATTGTC
GATTTTGCAGAAATTTTTCATACCATTAGCCTCTCTGCAACCTAGAACAATTTGATGACA
TATCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGACAAGCACTCGACCCCTGTGGCCGCCAGGCAGATGCACAAGTGCACACGGATGACAT
GCATGTTCCCACACACGTACCTGCTCTCGCCAACTGAGTTCCCACGCTGACCAACTGAGC
TGCCTGGGAGCTTGGAGAGGAAGGTTCCAAAGGGCACAAGCCGTTGAGTAGATGCCAGAG
AATTCTGAATGGAAAACCTAGGCCAGGACTTTCACCAGCATCGCAGCGGGAGGCCTGGGG
TGTTCCTCTGTGGGTCTTCAGCCCCGTGTTCCAGCTCTGACTTTTGAAAAGGACATTGTC
GATTTTGCAGAAATTTTTCATACCATTAGCCTCTCTGCAACCTAGAACAATTTGATGACA
TATCA

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               1-365, gnl|bosTau2|chr8 (29646364-29646007)
               

               
               1-365, gnl|canFam2|chr11 (56226824-56227637)
               

               
               1-365, gnl|echTel1|scaffold_318880 (2978-2133)
               

               
               1-365, gnl|hg17|chr9 (36827064-36827905)
               

               
               1-365, gnl|Hg17|chr9 (36827720-36827352)
               

               
               1-365, gnl|loxAfr1|scaffold_85363 (4600-5431)
               

               
               1-365, gnl|mm7|chr4 (44542328-44543092)
               

               
               1-365, gnl|Mm7|chr4 (44542909-44542582)
               

               
               1-365, gnl|oryCun1|scaffold_207216 (73473-72727)
               

               
               1-365, gnl|panTro1|chr11 (37439164-37440006)
               

               
               1-365, gnl|rheMac2|chr15 (40597443-40596598)
               

               
               1-365, gnl|rn3|chr5 (61013874-61014629)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-365, gnl|bosTau2|chr8 (29646364-29646007)
               

               
               1-365, gnl|canFam2|chr11 (56226824-56227637)
               

               
               1-365, gnl|echTel1|scaffold_318880 (2978-2133)
               

               
               1-365, gnl|hg17|chr9 (36827064-36827905)
               

               
               1-365, gnl|Hg17|chr9 (36827720-36827352)
               

               
               1-365, gnl|loxAfr1|scaffold_85363 (4600-5431)
               

               
               1-365, gnl|mm7|chr4 (44542328-44543092)
               

               
               1-365, gnl|Mm7|chr4 (44542909-44542582)
               

               
               1-365, gnl|oryCun1|scaffold_207216 (73473-72727)
               

               
               1-365, gnl|panTro1|chr11 (37439164-37440006)
               

               
               1-365, gnl|rheMac2|chr15 (40597443-40596598)
               

               
               1-365, gnl|rn3|chr5 (61013874-61014629)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cly (0.120642)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cly (0.120642)

	1-365, gnl\|bosTau2\|chr8 (29646364-29646007)
	1-365, gnl\|canFam2\|chr11 (56226824-56227637)
	1-365, gnl\|echTel1\|scaffold_318880 (2978-2133)
	1-365, gnl\|hg17\|chr9 (36827064-36827905)
	1-365, gnl\|Hg17\|chr9 (36827720-36827352)
	1-365, gnl\|loxAfr1\|scaffold_85363 (4600-5431)
	1-365, gnl\|mm7\|chr4 (44542328-44543092)
	1-365, gnl\|Mm7\|chr4 (44542909-44542582)
	1-365, gnl\|oryCun1\|scaffold_207216 (73473-72727)
	1-365, gnl\|panTro1\|chr11 (37439164-37440006)
	1-365, gnl\|rheMac2\|chr15 (40597443-40596598)
	1-365, gnl\|rn3\|chr5 (61013874-61014629)