Non-Coding RNA Search

rcly31b_g15.y1

Sequence:


               
               CCTCGTGCCGCGGAATTGTTGCTCCGCTGAGGTTGCAAACTCAGCCTGCTTCCCCGCAAA
AACCAGAGTTCTGCGCGGTAGAAAGACTTCAGGAAACTTTGGTGACATCCTCTGCACCCG
CCCTCTTCCCTCGTGGCAGTCACTGCGAGGACAAAGGCGGCCTGCGCTGATTTGGACGAG
GAGCGGCCCGTGTGGGCGGCCTTAGAGGCCGCAGACTTTTTCAGTTAGGAGAAGGATGAG
TAGCTTTACGAGGTGAAGATTACCGCCACAACCACCCCTCAGGGGTGACAGCCAGTCCAA
GTCTGATTTGTTAATAATCATTCTCATTCCCCCACCTTCCCCCCGCAGTGACCCAACACT
GGGAGATTGACCTGCGAGATGCTCTCCCTTTCACTCCAGTAGGTTTCTGTGGCCAAACGC
TCGAAAAGCCCCACCTTGCCCTACCTAATAAACAACTAACTTTGTTCTATTGAAAAAAAA
AAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTCGTGCCGCGGAATTGTTGCTCCGCTGAGGTTGCAAACTCAGCCTGCTTCCCCGCAAA
AACCAGAGTTCTGCGCGGTAGAAAGACTTCAGGAAACTTTGGTGACATCCTCTGCACCCG
CCCTCTTCCCTCGTGGCAGTCACTGCGAGGACAAAGGCGGCCTGCGCTGATTTGGACGAG
GAGCGGCCCGTGTGGGCGGCCTTAGAGGCCGCAGACTTTTTCAGTTAGGAGAAGGATGAG
TAGCTTTACGAGGTGAAGATTACCGCCACAACCACCCCTCAGGGGTGACAGCCAGTCCAA
GTCTGATTTGTTAATAATCATTCTCATTCCCCCACCTTCCCCCCGCAGTGACCCAACACT
GGGAGATTGACCTGCGAGATGCTCTCCCTTTCACTCCAGTAGGTTTCTGTGGCCAAACGC
TCGAAAAGCCCCACCTTGCCCTACCTAATAAACAACTAACTTTGTTCTATTGAAAAAAAA
AAA

Aligned organism(s): 13 entry(ies)

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Aligned organism(s): 13 entry(ies)

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               8-230, gnl|bosTau2|chr12 (8450407-8450631)
               

               
               8-230, gnl|canFam2|chr22 (4720538-4720359)
               

               
               8-230, gnl|dasNov1|scaffold_16041 (17173-16953)
               

               
               8-230, gnl|echTel1|scaffold_276329 (52389-52168)
               

               
               8-230, gnl|hg17|chr13 (49600075-49600300)
               

               
               8-230, gnl|Hg17|chr13 (49600079-49600299)
               

               
               8-230, gnl|loxAfr1|scaffold_6780 (46101-46333)
               

               
               8-230, gnl|mm7|chr14 (56551982-56552175)
               

               
               8-230, gnl|Mm7|chr14 (56551986-56552172)
               

               
               8-230, gnl|monDom2|scaffold_15 (56795623-56795418)
               

               
               8-230, gnl|panTro1|chr14_random (15752423-15752648)
               

               
               8-230, gnl|rheMac2|chr17 (28945256-28945481)
               

               
               8-230, gnl|rn3|chr15 (40854422-40854617)

Aligned organism(s): 13 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-230, gnl|bosTau2|chr12 (8450407-8450631)
               

               
               8-230, gnl|canFam2|chr22 (4720538-4720359)
               

               
               8-230, gnl|dasNov1|scaffold_16041 (17173-16953)
               

               
               8-230, gnl|echTel1|scaffold_276329 (52389-52168)
               

               
               8-230, gnl|hg17|chr13 (49600075-49600300)
               

               
               8-230, gnl|Hg17|chr13 (49600079-49600299)
               

               
               8-230, gnl|loxAfr1|scaffold_6780 (46101-46333)
               

               
               8-230, gnl|mm7|chr14 (56551982-56552175)
               

               
               8-230, gnl|Mm7|chr14 (56551986-56552172)
               

               
               8-230, gnl|monDom2|scaffold_15 (56795623-56795418)
               

               
               8-230, gnl|panTro1|chr14_random (15752423-15752648)
               

               
               8-230, gnl|rheMac2|chr17 (28945256-28945481)
               

               
               8-230, gnl|rn3|chr15 (40854422-40854617)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cly (0.120642)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cly (0.120642)

	8-230, gnl\|bosTau2\|chr12 (8450407-8450631)
	8-230, gnl\|canFam2\|chr22 (4720538-4720359)
	8-230, gnl\|dasNov1\|scaffold_16041 (17173-16953)
	8-230, gnl\|echTel1\|scaffold_276329 (52389-52168)
	8-230, gnl\|hg17\|chr13 (49600075-49600300)
	8-230, gnl\|Hg17\|chr13 (49600079-49600299)
	8-230, gnl\|loxAfr1\|scaffold_6780 (46101-46333)
	8-230, gnl\|mm7\|chr14 (56551982-56552175)
	8-230, gnl\|Mm7\|chr14 (56551986-56552172)
	8-230, gnl\|monDom2\|scaffold_15 (56795623-56795418)
	8-230, gnl\|panTro1\|chr14_random (15752423-15752648)
	8-230, gnl\|rheMac2\|chr17 (28945256-28945481)
	8-230, gnl\|rn3\|chr15 (40854422-40854617)