rcly31b_m4.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGAAGATGGCGGAGGGGCAGCAGGTGCTGGTGCTCGATGGCCGAGGCCATCTCCTGGGCC GCCTGGCGGCCATTGTGGCCAAGCAGGTACTTCTGGGCCGGAAGGTGGTGGTTGTGCGCT GTGAGGGCATCAACATTTCTGGCAATTTTTACAGAAACAAACTGAAGTACCTGGCCTTCC TCCGCAAGCGCATGAATACCAACCCGTCCCGAGGCCCCTACCACTTCCGAGCCCCCAGCC GCATCTTCTGGCGGACGGTGCGAGGCATGCTGCCCCACAAGACCAAGCGAGGGCAGGCCG CCCTGGACCGTCTCAAGGTGTTCGATGGGATCCCGCCACCCTATGACAAGAAAAAGCGCA TGGTGGTGCCTGCCGCCCTCAAGGTGGTGCGTCTGAAGCCTACGCGGAAGTTCGCCTACC TGGGACGCCTGGCTCATGAGGTTGGCTGGAAGTACCAGGCAGTTACAGCCACCCTGGAGG AGAAGAGGAAGGAGAAGGCCAAGATCCATTACCGCAAGAAGAAGCAGCTCATGAGGCTGC GGAAGCAGGCGGAAAAGAACGTAGAGAAGAAGATCGACAGGTTCACGGAGGTCCTCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGAAGATGGCGGAGGGGCAGCAGGTGCTGGTGCTCGATGGCCGAGGCCATCTCCTGGGCC GCCTGGCGGCCATTGTGGCCAAGCAGGTACTTCTGGGCCGGAAGGTGGTGGTTGTGCGCT GTGAGGGCATCAACATTTCTGGCAATTTTTACAGAAACAAACTGAAGTACCTGGCCTTCC TCCGCAAGCGCATGAATACCAACCCGTCCCGAGGCCCCTACCACTTCCGAGCCCCCAGCC GCATCTTCTGGCGGACGGTGCGAGGCATGCTGCCCCACAAGACCAAGCGAGGGCAGGCCG CCCTGGACCGTCTCAAGGTGTTCGATGGGATCCCGCCACCCTATGACAAGAAAAAGCGCA TGGTGGTGCCTGCCGCCCTCAAGGTGGTGCGTCTGAAGCCTACGCGGAAGTTCGCCTACC TGGGACGCCTGGCTCATGAGGTTGGCTGGAAGTACCAGGCAGTTACAGCCACCCTGGAGG AGAAGAGGAAGGAGAAGGCCAAGATCCATTACCGCAAGAAGAAGCAGCTCATGAGGCTGC GGAAGCAGGCGGAAAAGAACGTAGAGAAGAAGATCGACAGGTTCACGGAGGTCCTCA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 21-138, - strand, RNAz p=0.547137 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 21-138, - strand, RNAz p=0.547137 |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 2-597, gnl|bosTau2|chr19 (10396536-10397132) | |
| 2-597, gnl|Hg17|chr12 (3051579-3050981) | |
| 2-597, gnl|Mm7|chr15 (23587310-23587901) | |
| 21-326, gnl|bosTau2|chr14 (13930603-13930292) | |
| 21-326, gnl|Hg17|chr5 (83078552-83078226) | |
| 21-326, gnl|Mm7|chr15 (38199993-38200299) | |
| 409-533, gnl|bosTau2|chr18 (48630175-48630299) | |
| 409-533, gnl|canFam2|chr19 (17208347-17208473) | |
| 409-533, gnl|canFam2|chr22 (6688019-6687903) | |
| 409-533, gnl|danRer3|chr17 (2817323-2817208) | |
| 409-533, gnl|danRer3|chr17 (2817208-2817337) | |
| 409-533, gnl|dasNov1|scaffold_25652 (38948-39076) | |
| 409-533, gnl|dasNov1|scaffold_84517 (8626-8742) | |
| 409-533, gnl|echTel1|scaffold_191740 (5290-5420) | |
| 409-533, gnl|echTel1|scaffold_192408 (2187-2300) | |
| 409-533, gnl|fr1|chrUn (96875463-96875349) | |
| 409-533, gnl|fr1|chrUn (96875349-96875475) | |
| 409-533, gnl|hg17|chr14 (84487256-84487385) | |
| 409-533, gnl|Hg17|chr19 (54686492-54686616) | |
| 409-533, gnl|hg17|chr3 (11307173-11307303) | |
| 409-533, gnl|loxAfr1|scaffold_1595 (70205-70116) | |
| 409-533, gnl|loxAfr1|scaffold_21407 (25512-25390) | |
| 409-533, gnl|mm7|chr11 (86700540-86700424) | |
| 409-533, gnl|mm7|chr15 (23587838-23587708) | |
| 409-533, gnl|Mm7|chr7 (41301967-41301843) | |
| 409-533, gnl|monDom2|scaffold_35 (11391372-11391496) | |
| 409-533, gnl|oryCun1|scaffold_202341 (95245-95348) | |
| 409-533, gnl|oryCun1|scaffold_64192 (960-829) | |
| 409-533, gnl|panTro1|chr15 (84619273-84619402) | |
| 409-533, gnl|panTro1|chr2 (11710069-11710199) | |
| 409-533, gnl|rheMac2|chr2 (49737183-49737040) | |
| 409-533, gnl|rheMac2|chr7 (148224032-148224161) | |
| 409-533, gnl|rn3|chr18 (61899184-61899300) | |
| 409-533, gnl|rn3|chr18 (61899300-61899170) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-597, gnl|bosTau2|chr19 (10396536-10397132) | |
| 2-597, gnl|Hg17|chr12 (3051579-3050981) | |
| 2-597, gnl|Mm7|chr15 (23587310-23587901) | |
| 21-326, gnl|bosTau2|chr14 (13930603-13930292) | |
| 21-326, gnl|Hg17|chr5 (83078552-83078226) | |
| 21-326, gnl|Mm7|chr15 (38199993-38200299) | |
| 409-533, gnl|bosTau2|chr18 (48630175-48630299) | |
| 409-533, gnl|canFam2|chr19 (17208347-17208473) | |
| 409-533, gnl|canFam2|chr22 (6688019-6687903) | |
| 409-533, gnl|danRer3|chr17 (2817323-2817208) | |
| 409-533, gnl|danRer3|chr17 (2817208-2817337) | |
| 409-533, gnl|dasNov1|scaffold_25652 (38948-39076) | |
| 409-533, gnl|dasNov1|scaffold_84517 (8626-8742) | |
| 409-533, gnl|echTel1|scaffold_191740 (5290-5420) | |
| 409-533, gnl|echTel1|scaffold_192408 (2187-2300) | |
| 409-533, gnl|fr1|chrUn (96875463-96875349) | |
| 409-533, gnl|fr1|chrUn (96875349-96875475) | |
| 409-533, gnl|hg17|chr14 (84487256-84487385) | |
| 409-533, gnl|Hg17|chr19 (54686492-54686616) | |
| 409-533, gnl|hg17|chr3 (11307173-11307303) | |
| 409-533, gnl|loxAfr1|scaffold_1595 (70205-70116) | |
| 409-533, gnl|loxAfr1|scaffold_21407 (25512-25390) | |
| 409-533, gnl|mm7|chr11 (86700540-86700424) | |
| 409-533, gnl|mm7|chr15 (23587838-23587708) | |
| 409-533, gnl|Mm7|chr7 (41301967-41301843) | |
| 409-533, gnl|monDom2|scaffold_35 (11391372-11391496) | |
| 409-533, gnl|oryCun1|scaffold_202341 (95245-95348) | |
| 409-533, gnl|oryCun1|scaffold_64192 (960-829) | |
| 409-533, gnl|panTro1|chr15 (84619273-84619402) | |
| 409-533, gnl|panTro1|chr2 (11710069-11710199) | |
| 409-533, gnl|rheMac2|chr2 (49737183-49737040) | |
| 409-533, gnl|rheMac2|chr7 (148224032-148224161) | |
| 409-533, gnl|rn3|chr18 (61899184-61899300) | |
| 409-533, gnl|rn3|chr18 (61899300-61899170) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cly (0.120642) |