Non-Coding RNA Search

rcly32b_l15.y1

Sequence:


               
               ACACCAAACCCAGCAGTCCAAAACCAGGCACAGCCACCCGGAGGACAGTGCACCCCTCCC
GGTCAGCGACACGCGCCGCTGACCTCCGCGACTCTTAAGTCCATAGGTTTTACCTCCAGC
CAGCTGGTCTTCCCCACGATGGCGTGTGTGTCTTGGGCCCTGGTCACCCCCGTATGTCTG
AAACCTTGGTTCCTATTTTGACTTTGTTGACGTTGTGCCCCCCCAAGCCATTTCAGTGAA
AGCTTCCGCTGTTTCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACACCAAACCCAGCAGTCCAAAACCAGGCACAGCCACCCGGAGGACAGTGCACCCCTCCC
GGTCAGCGACACGCGCCGCTGACCTCCGCGACTCTTAAGTCCATAGGTTTTACCTCCAGC
CAGCTGGTCTTCCCCACGATGGCGTGTGTGTCTTGGGCCCTGGTCACCCCCGTATGTCTG
AAACCTTGGTTCCTATTTTGACTTTGTTGACGTTGTGCCCCCCCAAGCCATTTCAGTGAA
AGCTTCCGCTGTTTCCT

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

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               1-224, gnl|bosTau2|chr19 (46322936-46322711)
               

               
               1-224, gnl|canFam2|chr9 (5367241-5366963)
               

               
               1-224, gnl|hg17|chr17 (74599944-74600247)
               

               
               1-224, gnl|Hg17|chr17 (74600228-74599997)
               

               
               1-224, gnl|mm7|chr11 (118601332-118601616)
               

               
               1-224, gnl|Mm7|chr11 (118601598-118601378)
               

               
               1-224, gnl|monDom2|scaffold_18 (8635162-8635457)
               

               
               1-224, gnl|oryCun1|scaffold_128406 (483-272)
               

               
               1-224, gnl|panTro1|chr19 (78163985-78164287)
               

               
               1-224, gnl|rheMac2|chr16 (74347460-74347762)
               

               
               1-224, gnl|rn3|chr10 (108509992-108510278)

Aligned organism(s): 11 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-224, gnl|bosTau2|chr19 (46322936-46322711)
               

               
               1-224, gnl|canFam2|chr9 (5367241-5366963)
               

               
               1-224, gnl|hg17|chr17 (74599944-74600247)
               

               
               1-224, gnl|Hg17|chr17 (74600228-74599997)
               

               
               1-224, gnl|mm7|chr11 (118601332-118601616)
               

               
               1-224, gnl|Mm7|chr11 (118601598-118601378)
               

               
               1-224, gnl|monDom2|scaffold_18 (8635162-8635457)
               

               
               1-224, gnl|oryCun1|scaffold_128406 (483-272)
               

               
               1-224, gnl|panTro1|chr19 (78163985-78164287)
               

               
               1-224, gnl|rheMac2|chr16 (74347460-74347762)
               

               
               1-224, gnl|rn3|chr10 (108509992-108510278)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cly (0.120642)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cly (0.120642)

	1-224, gnl\|bosTau2\|chr19 (46322936-46322711)
	1-224, gnl\|canFam2\|chr9 (5367241-5366963)
	1-224, gnl\|hg17\|chr17 (74599944-74600247)
	1-224, gnl\|Hg17\|chr17 (74600228-74599997)
	1-224, gnl\|mm7\|chr11 (118601332-118601616)
	1-224, gnl\|Mm7\|chr11 (118601598-118601378)
	1-224, gnl\|monDom2\|scaffold_18 (8635162-8635457)
	1-224, gnl\|oryCun1\|scaffold_128406 (483-272)
	1-224, gnl\|panTro1\|chr19 (78163985-78164287)
	1-224, gnl\|rheMac2\|chr16 (74347460-74347762)
	1-224, gnl\|rn3\|chr10 (108509992-108510278)