Non-Coding RNA Search

rcmu31_j24.y1

Sequence:


               
               TTTTCTCTTTCCCTTATCCTCCACATCCAATCCATCTGCAAAGACTGTAAGCTTTATCCA
CAGAACTTATTCTGAGACCATTGCTTCTCATTAGCTTCACCCCTGTAAATCCCCATCCAA
AGATAACTCCACCTGCCTAGACTACCAGCAGGATTTCCTAAATGCTTTTCTTGCCTTCTC
ATTTTCCACCTAGCAGCCAGAGTGATCTTATAAAAATGTAAATTACTggagttcccattg
tggctcagcggtaacaaatccatttagtatccctgaggacacaggttcaatccctggcct
ctctcagtgggttaaggatctgggcattgtcctgagctgtggtgtaggttgcagactcgg
ctcggatctggcgtggctgtggctgtggcTTTGATTTGACCCCTAGCCTGGGAACTTCCA
TATGCTGAAAGAGTGGCCCTAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTCTCTTTCCCTTATCCTCCACATCCAATCCATCTGCAAAGACTGTAAGCTTTATCCA
CAGAACTTATTCTGAGACCATTGCTTCTCATTAGCTTCACCCCTGTAAATCCCCATCCAA
AGATAACTCCACCTGCCTAGACTACCAGCAGGATTTCCTAAATGCTTTTCTTGCCTTCTC
ATTTTCCACCTAGCAGCCAGAGTGATCTTATAAAAATGTAAATTACTggagttcccattg
tggctcagcggtaacaaatccatttagtatccctgaggacacaggttcaatccctggcct
ctctcagtgggttaaggatctgggcattgtcctgagctgtggtgtaggttgcagactcgg
ctcggatctggcgtggctgtggctgtggcTTTGATTTGACCCCTAGCCTGGGAACTTCCA
TATGCTGAAAGAGTGGCCCTAAAAAAAAAAAAAAAAAA

Aligned organism(s): 10 entry(ies)

More info

Aligned organism(s): 10 entry(ies)

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               6-227, gnl|bosTau2|chr16 (45081247-45081026)
               

               
               6-227, gnl|canFam2|chr7 (19742438-19743086)
               

               
               6-227, gnl|dasNov1|scaffold_8580 (67115-66426)
               

               
               6-227, gnl|hg17|chr1 (180120298-180120992)
               

               
               6-227, gnl|Hg17|chr1 (180120991-180120687)
               

               
               6-227, gnl|mm7|chr1 (152915367-152914712)
               

               
               6-227, gnl|Mm7|chr1 (152914831-152915040)
               

               
               6-227, gnl|panTro1|chr1 (162696045-162696739)
               

               
               6-227, gnl|rheMac2|chr1 (187244631-187243938)
               

               
               6-227, gnl|rn3|chr13 (67982909-67982123)

Aligned organism(s): 10 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-227, gnl|bosTau2|chr16 (45081247-45081026)
               

               
               6-227, gnl|canFam2|chr7 (19742438-19743086)
               

               
               6-227, gnl|dasNov1|scaffold_8580 (67115-66426)
               

               
               6-227, gnl|hg17|chr1 (180120298-180120992)
               

               
               6-227, gnl|Hg17|chr1 (180120991-180120687)
               

               
               6-227, gnl|mm7|chr1 (152915367-152914712)
               

               
               6-227, gnl|Mm7|chr1 (152914831-152915040)
               

               
               6-227, gnl|panTro1|chr1 (162696045-162696739)
               

               
               6-227, gnl|rheMac2|chr1 (187244631-187243938)
               

               
               6-227, gnl|rn3|chr13 (67982909-67982123)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cmu (0.186393)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cmu (0.186393)

	6-227, gnl\|bosTau2\|chr16 (45081247-45081026)
	6-227, gnl\|canFam2\|chr7 (19742438-19743086)
	6-227, gnl\|dasNov1\|scaffold_8580 (67115-66426)
	6-227, gnl\|hg17\|chr1 (180120298-180120992)
	6-227, gnl\|Hg17\|chr1 (180120991-180120687)
	6-227, gnl\|mm7\|chr1 (152915367-152914712)
	6-227, gnl\|Mm7\|chr1 (152914831-152915040)
	6-227, gnl\|panTro1\|chr1 (162696045-162696739)
	6-227, gnl\|rheMac2\|chr1 (187244631-187243938)
	6-227, gnl\|rn3\|chr13 (67982909-67982123)