Non-Coding RNA Search

rcmu35_k19.y1

Sequence:


               
               TTTTTTTTTTTTTTTTTGGCCTAGTAATTGACAAAACAGGTAATTTATCAATCAATCTTC
TAGCTATTACTGTAAATTAAACGGGGTTCAACTGAAAACCAAAGGACTGATCTATTTTAA
GTGGAAGACATTTAAGTACTGTAAGCTAATATCCATCTTGACTTAAATTAGCAGATCCTG
AGAGAAGTTTATTACATTTACAAGAATGGGCAGCCACCCTGAAGCAAACACAGAAGTCAT
TTTTATAAGGTGAAGACCCATTCTGTAGGCAGTGACACCCTGAGGGCCAAATAATTCAGG
GGCAACCAAGACACGTGTCACTGCAGTCTGTCACCGGACTTCTTAGTAACTGGGTTTTCT
TTCCCTACAATGAGTCATAGGTACCTGTGTTGTTATGCTATTCCGGGGGTCGCTTTCAGA
ACAGCTGCTATGTGGCGCAAGCTAAGCTTGAAAACACATATATTTTAGGATGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTGGCCTAGTAATTGACAAAACAGGTAATTTATCAATCAATCTTC
TAGCTATTACTGTAAATTAAACGGGGTTCAACTGAAAACCAAAGGACTGATCTATTTTAA
GTGGAAGACATTTAAGTACTGTAAGCTAATATCCATCTTGACTTAAATTAGCAGATCCTG
AGAGAAGTTTATTACATTTACAAGAATGGGCAGCCACCCTGAAGCAAACACAGAAGTCAT
TTTTATAAGGTGAAGACCCATTCTGTAGGCAGTGACACCCTGAGGGCCAAATAATTCAGG
GGCAACCAAGACACGTGTCACTGCAGTCTGTCACCGGACTTCTTAGTAACTGGGTTTTCT
TTCCCTACAATGAGTCATAGGTACCTGTGTTGTTATGCTATTCCGGGGGTCGCTTTCAGA
ACAGCTGCTATGTGGCGCAAGCTAAGCTTGAAAACACATATATTTTAGGATGG

Aligned organism(s): 9 entry(ies)

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Aligned organism(s): 9 entry(ies)

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               13-320, gnl|bosTau2|chr28 (29493406-29493104)
               

               
               13-320, gnl|canFam2|chr28 (3517200-3517760)
               

               
               13-320, gnl|hg17|chr10 (49447253-49447806)
               

               
               13-320, gnl|Hg17|chr10 (49447588-49447881)
               

               
               13-320, gnl|mm7|chr14 (30715624-30715052)
               

               
               13-320, gnl|oryCun1|scaffold_157378 (4465-5033)
               

               
               13-320, gnl|panTro1|chr8 (49774879-49775432)
               

               
               13-320, gnl|rheMac2|chr9 (48046991-48046441)
               

               
               13-320, gnl|rn3|chr16 (8824844-8824281)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-320, gnl|bosTau2|chr28 (29493406-29493104)
               

               
               13-320, gnl|canFam2|chr28 (3517200-3517760)
               

               
               13-320, gnl|hg17|chr10 (49447253-49447806)
               

               
               13-320, gnl|Hg17|chr10 (49447588-49447881)
               

               
               13-320, gnl|mm7|chr14 (30715624-30715052)
               

               
               13-320, gnl|oryCun1|scaffold_157378 (4465-5033)
               

               
               13-320, gnl|panTro1|chr8 (49774879-49775432)
               

               
               13-320, gnl|rheMac2|chr9 (48046991-48046441)
               

               
               13-320, gnl|rn3|chr16 (8824844-8824281)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cmu (0.186393)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cmu (0.186393)

	13-320, gnl\|bosTau2\|chr28 (29493406-29493104)
	13-320, gnl\|canFam2\|chr28 (3517200-3517760)
	13-320, gnl\|hg17\|chr10 (49447253-49447806)
	13-320, gnl\|Hg17\|chr10 (49447588-49447881)
	13-320, gnl\|mm7\|chr14 (30715624-30715052)
	13-320, gnl\|oryCun1\|scaffold_157378 (4465-5033)
	13-320, gnl\|panTro1\|chr8 (49774879-49775432)
	13-320, gnl\|rheMac2\|chr9 (48046991-48046441)
	13-320, gnl\|rn3\|chr16 (8824844-8824281)