Non-Coding RNA Search

rcmu40_j15.y1

Sequence:


               
               GGACCAGCACAGCTTTGAGCCAAGCCACGCAGGATGAATCTTCTGTTGCATCTGGAAGCT
CTCTCTGCCAAGCATATTAAAATTCAGCCGACGTCCCGAGTGAAAACTAACCCAAGTGCG
GAGCTATAAAAGACATGTCATGCATAGCCAAGCTTCAAAGGGATATTTAATAAACATATG
ATTAATGTCTGTGCAGATTTACTCCAATGGAGTTTTATTTTGAAGTGAAAATAGGACACT
GAGATGGAAATAAATCAAATGATTAACAGAGTTCCTGTATCATTGCCCTATAATCTGACC
ATCCATCAGTGAAATAGAATATTTATTTTAAATAATCTTAGCAAATGTTTTGATGTATAA
TAAACTAATTCAATTCAAATCAACTAAGTTATTAAAAAAAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGACCAGCACAGCTTTGAGCCAAGCCACGCAGGATGAATCTTCTGTTGCATCTGGAAGCT
CTCTCTGCCAAGCATATTAAAATTCAGCCGACGTCCCGAGTGAAAACTAACCCAAGTGCG
GAGCTATAAAAGACATGTCATGCATAGCCAAGCTTCAAAGGGATATTTAATAAACATATG
ATTAATGTCTGTGCAGATTTACTCCAATGGAGTTTTATTTTGAAGTGAAAATAGGACACT
GAGATGGAAATAAATCAAATGATTAACAGAGTTCCTGTATCATTGCCCTATAATCTGACC
ATCCATCAGTGAAATAGAATATTTATTTTAAATAATCTTAGCAAATGTTTTGATGTATAA
TAAACTAATTCAATTCAAATCAACTAAGTTATTAAAAAAAAC

Aligned organism(s): 9 entry(ies)

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Aligned organism(s): 9 entry(ies)

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               1-398, gnl|bosTau2|chr14 (14653695-14653308)
               

               
               1-398, gnl|canFam2|chr29 (8349183-8349679)
               

               
               1-398, gnl|dasNov1|scaffold_154198 (476-5)
               

               
               1-398, gnl|hg17|chr8 (54746655-54747159)
               

               
               1-398, gnl|Hg17|chr8 (54747116-54746718)
               

               
               1-398, gnl|loxAfr1|scaffold_183777 (1245-752)
               

               
               1-398, gnl|oryCun1|scaffold_183238 (7434-6945)
               

               
               1-398, gnl|panTro1|chr7 (56430820-56431318)
               

               
               1-398, gnl|rheMac2|chr8 (56264407-56264890)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-398, gnl|bosTau2|chr14 (14653695-14653308)
               

               
               1-398, gnl|canFam2|chr29 (8349183-8349679)
               

               
               1-398, gnl|dasNov1|scaffold_154198 (476-5)
               

               
               1-398, gnl|hg17|chr8 (54746655-54747159)
               

               
               1-398, gnl|Hg17|chr8 (54747116-54746718)
               

               
               1-398, gnl|loxAfr1|scaffold_183777 (1245-752)
               

               
               1-398, gnl|oryCun1|scaffold_183238 (7434-6945)
               

               
               1-398, gnl|panTro1|chr7 (56430820-56431318)
               

               
               1-398, gnl|rheMac2|chr8 (56264407-56264890)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cmu (0.186393)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cmu (0.186393)

	1-398, gnl\|bosTau2\|chr14 (14653695-14653308)
	1-398, gnl\|canFam2\|chr29 (8349183-8349679)
	1-398, gnl\|dasNov1\|scaffold_154198 (476-5)
	1-398, gnl\|hg17\|chr8 (54746655-54747159)
	1-398, gnl\|Hg17\|chr8 (54747116-54746718)
	1-398, gnl\|loxAfr1\|scaffold_183777 (1245-752)
	1-398, gnl\|oryCun1\|scaffold_183238 (7434-6945)
	1-398, gnl\|panTro1\|chr7 (56430820-56431318)
	1-398, gnl\|rheMac2\|chr8 (56264407-56264890)