Non-Coding RNA Search

rcov16b_j18.y1

Sequence:


               
               CGCTTCCTGCCCCATGGTCAGCTGCTCTTCCTCAATGACCAGTTTGTCCAGGTCTGGAGA
AGGAATTCAGTGCTGCCTGTCCCCGCTGACCCCTTCCTGGGCTGGGACTTCCCACCAGGG
CAAGGAGGGAAGACGGGAATGGACGGACACACAACTAGGTAGAGGTTGGCACCCACCTCC
TTCCCAGCCTGTGCCCAGCTTTGGAGTGCTGCTGCACGTAGGACAAATGGATGGGACAAG
CTGGCAGAAAAGGGGGCTGGGGAGAGGCTGGAGGGGAGGAGTCACAGAACATCCTGTGCC
TAGAGCTGCCTCGCGACTTACTCAGACTGCTGCAGCGGGCCATCCCTGCTCGTCCTTGAC
CCCACACTCTCCCATCCCTGCCGGCCAACCCCCAGCAATCTGCCAGCCACTAATGCTGGG
GCAGTAAGGAGCGGCCACTTGGAACTCAGCCCACTTTCTTCTTCCAACCCGTCGTCATTG
TAGCACAAAAGGCATCTCAGATTTCTAGGGTCAGGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCTTCCTGCCCCATGGTCAGCTGCTCTTCCTCAATGACCAGTTTGTCCAGGTCTGGAGA
AGGAATTCAGTGCTGCCTGTCCCCGCTGACCCCTTCCTGGGCTGGGACTTCCCACCAGGG
CAAGGAGGGAAGACGGGAATGGACGGACACACAACTAGGTAGAGGTTGGCACCCACCTCC
TTCCCAGCCTGTGCCCAGCTTTGGAGTGCTGCTGCACGTAGGACAAATGGATGGGACAAG
CTGGCAGAAAAGGGGGCTGGGGAGAGGCTGGAGGGGAGGAGTCACAGAACATCCTGTGCC
TAGAGCTGCCTCGCGACTTACTCAGACTGCTGCAGCGGGCCATCCCTGCTCGTCCTTGAC
CCCACACTCTCCCATCCCTGCCGGCCAACCCCCAGCAATCTGCCAGCCACTAATGCTGGG
GCAGTAAGGAGCGGCCACTTGGAACTCAGCCCACTTTCTTCTTCCAACCCGTCGTCATTG
TAGCACAAAAGGCATCTCAGATTTCTAGGGTCAGGGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-517, gnl|bosTau2|chr13 (33811709-33812223)
               

               
               1-517, gnl|Hg17|chr20 (3752855-3753648)
               

               
               1-517, gnl|Mm7|chr2 (130953637-130954114)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-517, gnl|bosTau2|chr13 (33811709-33812223)
               

               
               1-517, gnl|Hg17|chr20 (3752855-3753648)
               

               
               1-517, gnl|Mm7|chr2 (130953637-130954114)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cov (0.132153)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cov (0.132153)

	1-517, gnl\|bosTau2\|chr13 (33811709-33812223)
	1-517, gnl\|Hg17\|chr20 (3752855-3753648)
	1-517, gnl\|Mm7\|chr2 (130953637-130954114)